Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_O01
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    24   1.1  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   1.9  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    23   3.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   7.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 450 KPNGPIPKNYFFHLSVENLNGNENDVPVVSRFVLNN 557
           KP G   K +FF  S++  N    ++P+  +  L++
Sbjct: 612 KPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTLDD 647


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 450 KPNGPIPKNYFFHLSVENLNGNENDVPVVSRFVLNN 557
           KP G   K +FF  S++  N    ++P+  +  L++
Sbjct: 612 KPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTLDD 647


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 97  VVNDDNNIQMCSDQITNIINEYFYHS 20
           VV +D+N +  S++   I N YF +S
Sbjct: 105 VVKNDDNFRNISEKYQEIFNGYFLNS 130


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = +3

Query: 330 YNNLIEAEMEIYFEK----EVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSV 497
           Y+   E E ++Y  K    + R     ++ +  E   ++   +I  N  +  NY ++ + 
Sbjct: 39  YSRSREREQKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY 98

Query: 498 ENLNGNEN 521
            N N N N
Sbjct: 99  NNYNNNYN 106


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
 Frame = +3

Query: 330 YNNLIEAEMEIYFEK----EVRIIDVSQNTSFLEISNNRRDFVIKPNGPIPKNYFFHLSV 497
           Y+   E E ++Y  K    + R     ++ +  E   ++   +I  N P+  NY ++ + 
Sbjct: 39  YSRSREREQKLYKNKREYRKYRETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNNNY 98

Query: 498 ENLN 509
            N N
Sbjct: 99  NNYN 102


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 462 PIPKN-YFFHLSVENLNGNENDVPVVSRFVLNNV 560
           P+ +N Y+  LS  NLN    +  V S++  NNV
Sbjct: 258 PLTQNLYYSALSSHNLNYVNTEQFVKSQYQANNV 291


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -1

Query: 404 ILRYVNYPNFFF 369
           +++Y+N+  FFF
Sbjct: 6   VIKYINFDRFFF 17


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 309 GVVNFGLYNNLIEAEMEIYFEKEVRIIDVSQNTSFLEISN 428
           G+V   LY     A   I  EK   +++  ++ SFL+ SN
Sbjct: 79  GIVYKALYKGEQVAAKIIQTEKYSNMLNSEKHASFLKHSN 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,490
Number of Sequences: 438
Number of extensions: 4306
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)