Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_N23
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-4|CAB02106.1| 227|Caenorhabditis elegans Hypothetical pr... 233 3e-62
Z93393-5|CAB07690.1| 611|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF125955-11|AAK71367.1| 178|Caenorhabditis elegans Hypothetical... 28 2.5
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical pr... 27 5.7
AC024201-16|AAF36025.1| 192|Caenorhabditis elegans Hypothetical... 27 5.7
AC024201-15|AAF36024.1| 220|Caenorhabditis elegans Hypothetical... 27 5.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 7.5
>Z79755-4|CAB02106.1| 227|Caenorhabditis elegans Hypothetical
protein F43G9.5 protein.
Length = 227
Score = 233 bits (571), Expect = 3e-62
Identities = 102/138 (73%), Positives = 115/138 (83%)
Frame = +1
Query: 7 RSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGIKQ 186
RSVE VL+VHEH LPH+LLLQ+GT F+KLPGGEL GEDEI G+ RLL ETLGR DG
Sbjct: 75 RSVEAVLIVHEHSLPHILLLQIGTTFYKLPGGELELGEDEISGVTRLLNETLGRTDGETN 134
Query: 187 EWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAP 366
EW IED IGNWWRPNF+PP+YPYIP H+TKPKEH +L LVQL ++ F VPKN+KLVAAP
Sbjct: 135 EWTIEDEIGNWWRPNFDPPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAP 194
Query: 367 LFELYDNAQGYGPIISSL 420
LFELYDNA YGP+ISSL
Sbjct: 195 LFELYDNAAAYGPLISSL 212
>Z93393-5|CAB07690.1| 611|Caenorhabditis elegans Hypothetical
protein Y48E1B.4 protein.
Length = 611
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 157 TLGRQDGIKQEWLIEDTIGNWWRPNFEPPQ----YPYIPPHITKPKEHKRL 297
T R DG K W+ + + N+WR P Q P IPP + P + RL
Sbjct: 38 TTPRPDG-KTRWIPQYNLQNFWRRKIPPLQCGLIEPLIPPRLRSPDDFSRL 87
>AF125955-11|AAK71367.1| 178|Caenorhabditis elegans Hypothetical
protein F46E10.11 protein.
Length = 178
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
Frame = +2
Query: 293 GCSWCNCRTGLCSR---CQR-TINW 355
GCS CNC T CS CQ+ NW
Sbjct: 59 GCSTCNCNTATCSTSSYCQQIRSNW 83
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 86 KNAVPSCRSSTCGRPCSCTSNTPS 15
+ A PSC ++ CG P C PS
Sbjct: 283 RQAGPSCMTARCGTPAGCAMVRPS 306
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 86 KNAVPSCRSSTCGRPCSCTSNTPS 15
+ A PSC ++ CG P C PS
Sbjct: 388 RQAGPSCMTARCGTPAGCAMVRPS 411
>Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical
protein R07E3.1b protein.
Length = 348
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 97 GGELNPGE----DEIDGLKRLLTETLGRQDGIKQEWLIEDTIGNWW 222
GG P E +E+ GL LL G ++ W+++++ GN W
Sbjct: 276 GGVFTPSEYACKNEVIGLHALLITGYGTSKTGEKYWIVKNSWGNTW 321
>Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical
protein R07E3.1a protein.
Length = 402
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 97 GGELNPGE----DEIDGLKRLLTETLGRQDGIKQEWLIEDTIGNWW 222
GG P E +E+ GL LL G ++ W+++++ GN W
Sbjct: 330 GGVFTPSEYACKNEVIGLHALLITGYGTSKTGEKYWIVKNSWGNTW 375
>AC024201-16|AAF36025.1| 192|Caenorhabditis elegans Hypothetical
protein Y71F9B.13b protein.
Length = 192
Score = 27.1 bits (57), Expect = 5.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 211 GNWWRPNFEPPQY 249
GNW+ PN+ PP Y
Sbjct: 75 GNWYYPNYYPPTY 87
>AC024201-15|AAF36024.1| 220|Caenorhabditis elegans Hypothetical
protein Y71F9B.13a protein.
Length = 220
Score = 27.1 bits (57), Expect = 5.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 211 GNWWRPNFEPPQY 249
GNW+ PN+ PP Y
Sbjct: 103 GNWYYPNYYPPTY 115
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 223 RPNFEPPQYPYIPPHITKPKEH 288
+PN PPQ PY P P +H
Sbjct: 47 QPNLPPPQQPYEHPAQQHPPQH 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,394,917
Number of Sequences: 27780
Number of extensions: 218130
Number of successful extensions: 785
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -