BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_N21
(510 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-6|CAJ14157.1| 375|Anopheles gambiae RrnaAD, ribosomal ... 25 1.5
DQ383819-1|ABD38144.1| 377|Anopheles gambiae abdominal-B protein. 23 6.0
>CR954257-6|CAJ14157.1| 375|Anopheles gambiae RrnaAD, ribosomal RNA
adenine dimethylaseprotein.
Length = 375
Score = 25.0 bits (52), Expect = 1.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 496 YRISYIHYFCQNMVQCKRLIDIKSTVYKINVSFKLCSYIILITRKHWKFYSNKI 335
+R+SY+ F C L I ++ VSF+L S ++ T K+ ++ N I
Sbjct: 69 WRLSYLDGFDNGQRVCGMLSGIPHRKWQEEVSFRLFS--VIGTVKYLRYLMNSI 120
>DQ383819-1|ABD38144.1| 377|Anopheles gambiae abdominal-B protein.
Length = 377
Score = 23.0 bits (47), Expect = 6.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 148 QQPSYEILIDVRPKYY 195
Q P Y + D++P YY
Sbjct: 163 QYPPYALATDIKPMYY 178
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,410
Number of Sequences: 2352
Number of extensions: 7313
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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