Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_N21
         (510 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    30   0.85 
U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AF043697-7|AAM15580.1|  229|Caenorhabditis elegans Hypothetical ...    28   3.4  
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass...    28   4.5  
U28940-5|AAA68351.1|  156|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical...    27   7.9  

>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 144 TTASCLYRPMCKTALPPQCVQVNT 73
           TTASC+  P C+ A  PQCVQ  T
Sbjct: 294 TTASCI--PACQPACTPQCVQAVT 315


>U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical
           protein C26F1.6 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 188 NIMIILYYGVKLTSELILYTYN*KYFKKHRLN 283
           N+M+++ +G  LT+ +  Y Y  K F+K  +N
Sbjct: 11  NVMVLMCFGGILTNFISFYIYTRKTFRKKSIN 42


>AF043697-7|AAM15580.1|  229|Caenorhabditis elegans Hypothetical
           protein F56C11.4 protein.
          Length = 229

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +3

Query: 207 TMELSLLLNSFYIPIIRNILKNIDLIVFLETSVDI 311
           T ++  L    Y+ +  N+L+N+D +VF ++ +D+
Sbjct: 176 TADIGALAMRNYMELAANLLENVDYVVFEKSPIDL 210


>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform a protein.
          Length = 1112

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 439 IDIKSTVYKINVSFKLCSYIILITRKHWKFYS 344
           +DI S +  +  S+  CSYI+L     W FYS
Sbjct: 658 VDILSEILILQTSYLSCSYILLYL---WNFYS 686


>U28940-5|AAA68351.1|  156|Caenorhabditis elegans Hypothetical
           protein T24H7.3 protein.
          Length = 156

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = -3

Query: 472 FCQNMVQCKRLIDIKSTVYKINVS-FKLCSYIILITRKHWKFYSNKI*LVNSSF*MSTDV 296
           F  N++    ++   S +  INV+ F+  ++ I +T+K W+  SN+   +N  F    D+
Sbjct: 55  FAVNLIGVSEMLPRTSQLLFINVTTFENHTHCIELTQKGWRVASNRNDCMNGDF-RQLDI 113

Query: 295 SRNTIKSMFFKIFLIIGI*NE-FRSKLNS 212
                +S+   +  I  +  E F SKL S
Sbjct: 114 HTKYFESLHTLLMDISPLFRETFGSKLIS 142


>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
            protein Y67A10A.3 protein.
          Length = 1237

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 371  NQYNV*T*FKRNVNLIYSRFNINKSFTLDHILTKI 475
            N+ NV   F  NV L  S FN +K     H+LT++
Sbjct: 1061 NRMNVPYLFGTNVTLYNSNFNCSKWDQFQHVLTEL 1095


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,026,793
Number of Sequences: 27780
Number of extensions: 162129
Number of successful extensions: 420
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)