Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_N12
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   4.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.8  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 216 PVY*INKRCSC 248
           P+Y  NKRC+C
Sbjct: 470 PIYECNKRCNC 480


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 15/61 (24%), Positives = 26/61 (42%)
 Frame = +2

Query: 326 RNGFS*PKNKWSVRFPLHSRK*IYKLFFM*SRSEEVI*QQYLAKIRNSLFLKYTPAILSY 505
           RNG + P+ +     PLH +K +  +  + +R    I   Y+     +    YT   L+ 
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQGLNV 360

Query: 506 L 508
           L
Sbjct: 361 L 361


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 62  INNVSYIDKLLNGNM-KTCQYVKICYLIAHV 151
           IN+VSYIDK+       +   + ICY + +V
Sbjct: 462 INSVSYIDKVARIVFPASFGLLNICYWVIYV 492


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 15/61 (24%), Positives = 26/61 (42%)
 Frame = +2

Query: 326 RNGFS*PKNKWSVRFPLHSRK*IYKLFFM*SRSEEVI*QQYLAKIRNSLFLKYTPAILSY 505
           RNG + P+ +     PLH +K +  +  + +R    I   Y+     +    YT   L+ 
Sbjct: 301 RNGLAFPQRETGATVPLHMQKYVQMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQGLNV 360

Query: 506 L 508
           L
Sbjct: 361 L 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,407
Number of Sequences: 438
Number of extensions: 4194
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)