Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_N07
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              49   4e-08
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    25   0.58 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.58 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 349 DPCMKVHCSAGRVCEINEHGE-AICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 525
           DPC   +C  G+ CE++ +   A+C C+++CP      R VC +  + +++ CE++R  C
Sbjct: 80  DPCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 289 ELSQPPGIVSRPGSPPMPFSRCSDSEMSPRGSPAD 185
           E  QP G +  P S P+   +   +++  RG+P D
Sbjct: 14  EEQQPSGDILSPSSEPLDNDKEQSAQVCYRGAPQD 48


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 289 ELSQPPGIVSRPGSPPMPFSRCSDSEMSPRGSPAD 185
           E  QP G +  P S P+   +   +++  RG+P D
Sbjct: 14  EEQQPSGDILSPSSEPLDNDKEQSAQVCYRGAPQD 48


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 179 ADVGGASPRGHLRVGAPRERHGRRAWTRDD 268
           +D G  + RGH    +    HG ++WT++D
Sbjct: 387 SDSGENNSRGHSGQSSSHH-HGSKSWTQED 415


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -3

Query: 538 GRG---RGSAVGTPRSPMTRSR*SL 473
           GRG    GS  G+PRSP + SR S+
Sbjct: 310 GRGSVHNGSNNGSPRSPESNSRCSV 334


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +1

Query: 589 YGTCREMPEC--SENEMSDFPRRMRDWLFNIMRDLAERR 699
           +  C ++ E   S NE++  P  +RD       DL E R
Sbjct: 427 FRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENR 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,128
Number of Sequences: 438
Number of extensions: 4329
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)