Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_N04
(508 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 46 2e-06
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 46 4e-06
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 46 4e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 2e-05
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 42 4e-05
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 7e-05
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 38 7e-04
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.005
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 34 0.011
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 34 0.014
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 29 0.53
SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein Pvg5|Schizos... 27 1.6
SPCC1183.06 |ung1||uracil DNA N-glycosylase Ung1|Schizosaccharom... 26 2.8
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 26 2.8
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 25 4.9
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 25 6.5
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 25 6.5
SPBC1685.07c |||amino acid transporter |Schizosaccharomyces pomb... 25 6.5
SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1 |Schi... 25 8.6
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 46.4 bits (105), Expect = 2e-06
Identities = 37/131 (28%), Positives = 60/131 (45%)
Frame = +2
Query: 110 MAFNGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKCAANGKKPLIIK 289
M G+V L+ FT+ G +VA G ++ KV + AA L ++
Sbjct: 1 MTVEGRVVLITGAAGGIGKVLCKMFTELGDRVA--GIDIVDPSKV--QDAA-----LALQ 51
Query: 290 ADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVIQ 469
AD+S D++ T + K I G ID+L+NNAG+ + E E++D ++ LR
Sbjct: 52 ADVSKADQIETAIEKVIQTLGPIDVLINNAGLAD-DTPFEQLSHESWDHDVSLVLRGNYL 110
Query: 470 LTNLATPHIVE 502
PH+ +
Sbjct: 111 TQRYVIPHMAK 121
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 45.6 bits (103), Expect = 4e-06
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +2
Query: 248 AKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEA 427
AK + + L+ + D++N + V K I FG+ID+L+NNAG + S LE E
Sbjct: 7 AKVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAG-YSVYSPLESTTEEQ 65
Query: 428 YDTVMATNLRAVIQLTNLATP 490
+ TN+ +++ TP
Sbjct: 66 IHNIFNTNVFGALEVIKAITP 86
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 45.6 bits (103), Expect = 4e-06
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +2
Query: 248 AKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEA 427
AK + + L+ + D++N + V K I FG+ID+L+NNAG + S LE E
Sbjct: 7 AKVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAG-YSVYSPLESTTEEQ 65
Query: 428 YDTVMATNLRAVIQLTNLATP 490
+ TN+ +++ TP
Sbjct: 66 IHNIFNTNVFGALEVIKAITP 86
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 43.6 bits (98), Expect = 2e-05
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = +2
Query: 122 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKC--AANGKKPLIIKAD 295
GKVALV + ++GA+V + GRN K +KV + K ++ D
Sbjct: 42 GKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 296 LSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVIQLT 475
L + + V I K+ ILVNNAG++ L + Y+ + TN + T
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFEL---TKDGYELQIQTNYLSHYLFT 158
Query: 476 NLATP 490
L P
Sbjct: 159 ELLLP 163
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 42.3 bits (95), Expect = 4e-05
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = +2
Query: 98 NIL-VMAFNGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKCA-ANGK 271
NIL +++ GK A+V F + GA IV N T EK A + A ANG
Sbjct: 12 NILDLLSLKGKNAVVFGGARGIGHAICSVFAEAGANAFIV-YNTTPGEKAAKEIAQANGV 70
Query: 272 KPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATN 451
K K D++ EV ++ F IDI+V N G+ S ++ E + + N
Sbjct: 71 KTYTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAID-MTYEEFANEINVN 129
Query: 452 LRAVIQLTNLATP 490
L V + + A P
Sbjct: 130 LLGVFNVAHNAGP 142
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 41.5 bits (93), Expect = 7e-05
Identities = 25/127 (19%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Frame = +2
Query: 119 NGKVALVXXXXXXXXXXXXXQFTKEG-AQVAIVGRNVTKLEKVAAKCAANGKKPLI-IKA 292
+GK L+ + K ++ + R + +E++A + + + ++ +K
Sbjct: 5 DGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKL 64
Query: 293 DLSNQDEVSTIVSKTIDAFGKIDILVNNAGM-IKLGSLLEGNLLEAYDTVMATNLRAVIQ 469
D+S+ + ++ F ID+L+NNAG+ + +++ N+ +A T++ TN+ ++
Sbjct: 65 DVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAV-TMITTNVLGMMA 123
Query: 470 LTNLATP 490
+T P
Sbjct: 124 MTRAVLP 130
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 38.3 bits (85), Expect = 7e-04
Identities = 30/122 (24%), Positives = 48/122 (39%)
Frame = +2
Query: 107 VMAFNGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKCAANGKKPLII 286
+ + GK +V F + G V I EK G + +
Sbjct: 16 LFSLKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTL 75
Query: 287 KADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVI 466
K D+S D V V + F +I ++V NAGM S+L+ E ++ VM N +V
Sbjct: 76 KIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHE-FEKVMNINTNSVY 134
Query: 467 QL 472
++
Sbjct: 135 RV 136
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 35.5 bits (78), Expect = 0.005
Identities = 25/90 (27%), Positives = 37/90 (41%)
Frame = +2
Query: 215 GRNVTKLEKVAAKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKL 394
G NV + K L +K D+++ V T FG +DI++NNAG +
Sbjct: 29 GYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLV 88
Query: 395 GSLLEGNLLEAYDTVMATNLRAVIQLTNLA 484
G N+ E + M N V +T A
Sbjct: 89 GEFESYNIEEMH-RQMNVNFWGVAYITKEA 117
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 34.3 bits (75), Expect = 0.011
Identities = 26/106 (24%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +2
Query: 197 AQVAIVGRNVT-KLEKVAAKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVN 373
A+V V R++T +LE + + N + +K D++ + S + I FGK+D ++
Sbjct: 30 AKVIAVSRSLTPELETLLIQ---NPDSFVHVKGDVTEVGKAS--IETAIKKFGKLDSVIL 84
Query: 374 NAGMIK-LGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEAK 508
NAG+++ + + + ++ E + + N +V++ A PH+ + K
Sbjct: 85 NAGVLEPIAKIADADINE-WRKLFDINFFSVVETVKYAIPHLRKTK 129
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 33.9 bits (74), Expect = 0.014
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +2
Query: 266 GKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMA 445
G+ I + L D +V + G ID+LVNN ++ +E E +D
Sbjct: 92 GRNCWIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFK 151
Query: 446 TNLRAVIQLTNLATPHI 496
TN+ + +T A H+
Sbjct: 152 TNIFSFFWVTKAAISHM 168
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 28.7 bits (61), Expect = 0.53
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 281 IIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGM 385
IIK D+S+ + + + A GK+D+L N+G+
Sbjct: 58 IIKLDISSLESANEAAQEVAKAVGKVDVLWVNSGI 92
>SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein
Pvg5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 130 NFAVESHNKNVVEEICNLQSNLGHDSL 50
N+ ++ N NV+ +IC SN HDSL
Sbjct: 97 NWYLKERNINVLSDICFPLSNNAHDSL 123
>SPCC1183.06 |ung1||uracil DNA N-glycosylase
Ung1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 26.2 bits (55), Expect = 2.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 306 WLDKSALMINGFLPLAAHFAATFS 235
W D+ LM+N L + AH AA+ S
Sbjct: 192 WADQGILMLNASLTVRAHQAASHS 215
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 191 EGAQVAIVGRNVTKLEKVAAKCAANGKKPLIIKADLSNQDEV--STIVSKTIDAFGKIDI 364
+ A + I+G +T + A G+K L+++ D+S D + + I+A KI I
Sbjct: 4 QDADIIIIGAGITGCA-LGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGI 62
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 25.4 bits (53), Expect = 4.9
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -2
Query: 360 SIFPKASIVLLTIVLTSSWLDKSALMI 280
++FP+ +L+ ++LT W K++++I
Sbjct: 1552 NVFPEVVDLLVRLILTEDWETKASIVI 1578
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 279 NGFLPLAAHFAATFSSFVTFLPTIATW 199
+GFLPLA+ F + S +P + T+
Sbjct: 140 SGFLPLASKFPSALSRVAKEIPILLTY 166
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.0 bits (52), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 335 TIDAFGKIDILVNNAGMIKLGSLLEG 412
T+DA + LV KL SLLEG
Sbjct: 52 TVDALDNVSALVEGKVSSKLSSLLEG 77
>SPBC1685.07c |||amino acid transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 362 ILVNNAGMIKLGSLLEGNLLEAYD 433
+LV G + GSL GN++ YD
Sbjct: 253 LLVAITGYLSFGSLASGNIIAMYD 276
>SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 24.6 bits (51), Expect = 8.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 269 KKPLIIKADLSNQDEVSTIVSKT 337
KK L+ D+++ D+V T SKT
Sbjct: 125 KKELVFDIDMTDYDDVRTCCSKT 147
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,883,492
Number of Sequences: 5004
Number of extensions: 33783
Number of successful extensions: 102
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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