Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_N02
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQ41 Cluster: Signal recognition particle 19 kDa prot... 264 7e-70
UniRef50_P49963 Cluster: Signal recognition particle 19 kDa prot... 164 1e-39
UniRef50_P09132 Cluster: Signal recognition particle 19 kDa prot... 136 2e-31
UniRef50_A7RJY5 Cluster: Predicted protein; n=1; Nematostella ve... 129 4e-29
UniRef50_Q5DD78 Cluster: SJCHGC02662 protein; n=1; Schistosoma j... 126 3e-28
UniRef50_O61749 Cluster: Probable signal recognition particle 19... 113 2e-24
UniRef50_Q943Z6 Cluster: Signal recognition particle 19 kDa prot... 85 1e-15
UniRef50_A2YCL3 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_UPI0000499D1D Cluster: Signal recognition particle 19 k... 71 2e-11
UniRef50_A0DTL4 Cluster: Chromosome undetermined scaffold_63, wh... 66 4e-10
UniRef50_Q7YYK3 Cluster: SRP19-domain protein; n=3; Cryptosporid... 62 6e-09
UniRef50_Q554G7 Cluster: Signal recognition particle 19 kDa subu... 62 1e-08
UniRef50_Q8I5P4 Cluster: Signal recognition particle 19 kd prote... 59 6e-08
UniRef50_A2FBB0 Cluster: SRP19 protein; n=1; Trichomonas vaginal... 58 2e-07
UniRef50_P41922 Cluster: Signal recognition particle SEC65 subun... 56 5e-07
UniRef50_Q4N9F1 Cluster: Signal recognition particle, putative; ... 56 7e-07
UniRef50_Q01H41 Cluster: Signal recognition particle, subunit Sr... 54 2e-06
UniRef50_UPI00006CB16C Cluster: SRP19 protein; n=1; Tetrahymena ... 52 7e-06
UniRef50_Q6LY84 Cluster: Signal recognition particle protein SRP... 51 2e-05
UniRef50_A3BBG2 Cluster: Putative uncharacterized protein; n=1; ... 36 6e-05
UniRef50_Q0V1U5 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A4FX62 Cluster: Ribonucleoprotein complex SRP, Srp19 co... 48 1e-04
UniRef50_Q8SRC3 Cluster: Signal recognition particle SEC65 subun... 48 2e-04
UniRef50_A7AVA7 Cluster: Signal recognition particle SRP19 subun... 46 6e-04
UniRef50_A4R4M6 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_Q4P7D0 Cluster: Putative uncharacterized protein; n=1; ... 43 0.004
UniRef50_P29478 Cluster: Signal recognition particle subunit SEC... 43 0.005
UniRef50_O14415 Cluster: Signal recognition particle SEC65 subun... 43 0.005
UniRef50_O26267 Cluster: Signal recognition particle 19 kDa prot... 42 0.007
UniRef50_Q58440 Cluster: Signal recognition particle 19 kDa prot... 42 0.007
UniRef50_Q5V5S9 Cluster: Signal recognition particle 19 kDa prot... 42 0.010
UniRef50_Q5KAC1 Cluster: Signal recognition particle protein, pu... 42 0.013
UniRef50_Q8WZS0 Cluster: Related to signal recognition particle ... 41 0.017
UniRef50_A2DEL3 Cluster: SRP19 protein; n=1; Trichomonas vaginal... 41 0.022
UniRef50_Q8TV49 Cluster: Signal recognition particle 19 kDa prot... 40 0.029
UniRef50_UPI00015BB03D Cluster: signal recognition particle, sub... 40 0.051
UniRef50_A0RXG6 Cluster: Signal recognition particle, 19 kDa pro... 39 0.089
UniRef50_A6RJV5 Cluster: Signal recognition particle protein Sec... 38 0.20
UniRef50_UPI0000583E12 Cluster: PREDICTED: hypothetical protein;... 37 0.27
UniRef50_Q6PW22 Cluster: Signal recognition particle protein SRP... 37 0.27
UniRef50_P46030 Cluster: Peptide transporter PTR2; n=5; Saccharo... 37 0.36
UniRef50_Q2NF32 Cluster: Signal recognition particle 19 kDa prot... 36 0.47
UniRef50_O29010 Cluster: Signal recognition particle 19 kDa prot... 36 0.63
UniRef50_Q8XZ52 Cluster: Putative integrase/recombinase protein;... 36 0.83
UniRef50_A4VDB1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_A2BJ20 Cluster: Signal recognition particle 19 kDa prot... 35 1.1
UniRef50_Q9YDZ7 Cluster: Signal recognition particle 19 kDa prot... 35 1.4
UniRef50_A7IAR2 Cluster: Ribonucleoprotein complex SRP, Srp19 co... 34 1.9
UniRef50_A5UNC8 Cluster: Signal recognition particle, subunit SR... 34 1.9
UniRef50_UPI0000E488D0 Cluster: PREDICTED: hypothetical protein,... 33 4.4
UniRef50_Q5AJA7 Cluster: Potential fungal zinc cluster transcrip... 33 4.4
UniRef50_Q6T8F8 Cluster: RepC; n=1; Chlamydia suis|Rep: RepC - C... 33 5.8
UniRef50_Q7RBX7 Cluster: Drosophila melanogaster LD30622p-relate... 33 5.8
UniRef50_Q8TTY3 Cluster: Signal recognition particle 19 kDa prot... 33 5.8
UniRef50_Q2GCM3 Cluster: Strain-specific surface antigen; n=1; N... 32 7.7
UniRef50_Q625S7 Cluster: Putative uncharacterized protein CBG011... 32 7.7
UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1; T... 32 7.7
UniRef50_Q9HQ21 Cluster: Signal recognition particle 19 kDa prot... 32 7.7
>UniRef50_Q1HQ41 Cluster: Signal recognition particle 19 kDa
protein; n=1; Bombyx mori|Rep: Signal recognition
particle 19 kDa protein - Bombyx mori (Silk moth)
Length = 148
Score = 264 bits (648), Expect = 7e-70
Identities = 119/135 (88%), Positives = 128/135 (94%)
Frame = +3
Query: 42 MATLITSWNPEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLA 221
MA++ITSWNPEKKH+DVERWICIYPAYLNSKKTLA+GR+LPKS C+ENPTHQEIRDVLLA
Sbjct: 1 MASMITSWNPEKKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLA 60
Query: 222 TGLQVGVENKLYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLK 401
TGL+VGVENKLYSRE SKEMLYRGRIRVQ+KNDDG PV PEFPTRESVMKY+GESIPKLK
Sbjct: 61 TGLRVGVENKLYSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLK 120
Query: 402 TRQNRPAEQQPQAAN 446
TRQNRP EQQPQ N
Sbjct: 121 TRQNRPVEQQPQPTN 135
>UniRef50_P49963 Cluster: Signal recognition particle 19 kDa
protein; n=8; Endopterygota|Rep: Signal recognition
particle 19 kDa protein - Drosophila melanogaster (Fruit
fly)
Length = 160
Score = 164 bits (398), Expect = 1e-39
Identities = 71/126 (56%), Positives = 93/126 (73%)
Frame = +3
Query: 60 SWNPEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVG 239
+W+P KH D+ERWICIYPAY+N KKT +GR+LPK C++NP++ EIRDVL + LQ
Sbjct: 10 NWSPSMKHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNLQFL 69
Query: 240 VENKLYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRP 419
+ENK Y RE S EM +RGR+RVQL+N DGT +FPTRES+M ++ IP+LKTRQN+
Sbjct: 70 MENKKYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNKS 129
Query: 420 AEQQPQ 437
+ Q
Sbjct: 130 GDSYHQ 135
>UniRef50_P09132 Cluster: Signal recognition particle 19 kDa
protein; n=31; Coelomata|Rep: Signal recognition
particle 19 kDa protein - Homo sapiens (Human)
Length = 144
Score = 136 bits (330), Expect = 2e-31
Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Frame = +3
Query: 87 DVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSR 263
D +R+ICIYPAYLN+KKT+A+GR++P S +ENPT EI+DV A GL V +E NK+YSR
Sbjct: 11 DQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSR 70
Query: 264 ERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNR 416
E ++++ YRGR+RVQLK +DG+ +FP+R+SVM Y E IPKLKTR +
Sbjct: 71 EWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 121
>UniRef50_A7RJY5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 148
Score = 129 bits (312), Expect = 4e-29
Identities = 53/112 (47%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Frame = +3
Query: 93 ERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVEN-KLYSRER 269
+RW+ +YPAYLNS++T+ QGR++PK+ ++NPT EIRD+ + L +EN K Y +E
Sbjct: 13 DRWVTVYPAYLNSRRTVCQGRRVPKAKAVDNPTVSEIRDICTSQNLSCELENNKFYPKES 72
Query: 270 SKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRPAE 425
+K+++ +GR+R+QLKN DGTPV + P R+++ ++GE IPKLKTRQ + +
Sbjct: 73 AKDVVCKGRVRIQLKNSDGTPVNADIPNRKALFCFLGEMIPKLKTRQTKTGQ 124
>UniRef50_Q5DD78 Cluster: SJCHGC02662 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02662 protein - Schistosoma
japonicum (Blood fluke)
Length = 148
Score = 126 bits (304), Expect = 3e-28
Identities = 55/125 (44%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Frame = +3
Query: 51 LITSWNPEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGL 230
L++ ++P+ H+ ERWIC+YPAYLN+++T AQGRKL +C++NP H E+ +L L
Sbjct: 5 LLSPFSPDIPHSAKERWICVYPAYLNNRRTRAQGRKLSVEHCVDNPKHSEVTMILGKLSL 64
Query: 231 QVGVENKLYSRERSK-EMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTR 407
+E K++ +ER E + + R+RV LKNDDG+PV +FP R+S++ Y+G+++P +++R
Sbjct: 65 DYLLETKVHPKERDAFEPMNKWRVRVHLKNDDGSPVNEQFPNRQSLLTYLGKALPVVRSR 124
Query: 408 QNRPA 422
RPA
Sbjct: 125 --RPA 127
>UniRef50_O61749 Cluster: Probable signal recognition particle 19
kDa protein; n=2; Caenorhabditis|Rep: Probable signal
recognition particle 19 kDa protein - Caenorhabditis
elegans
Length = 160
Score = 113 bits (273), Expect = 2e-24
Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = +3
Query: 93 ERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSRER 269
+RWI IYPAY++ KKT QGRK+ + +ENPT EI DVL A G +E K Y R+
Sbjct: 13 KRWIVIYPAYIDKKKTAKQGRKISQILAVENPTSVEIHDVLAAVGFNPLLERTKCYPRDG 72
Query: 270 SKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRPAEQQPQAAN 446
++ +GR+RVQLKNDDGT K E TR+ + K V E IPKLKTRQ P P A+
Sbjct: 73 ERDFEVQGRVRVQLKNDDGT-AKHEQKTRDEIFKMVAEMIPKLKTRQ--PGYTAPSVAS 128
>UniRef50_Q943Z6 Cluster: Signal recognition particle 19 kDa
protein; n=4; Magnoliophyta|Rep: Signal recognition
particle 19 kDa protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 145
Score = 84.6 bits (200), Expect = 1e-15
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Frame = +3
Query: 87 DVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSR 263
++++W+ IYP Y+NSKKT+A+GR++ S ENP EI D L VE +K Y R
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYPR 66
Query: 264 ERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPK-----LKTRQNRPAEQ 428
+ + GR+RVQLK +DGT + P +R+ +M+ + E +P+ K + +Q
Sbjct: 67 ----DFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPERVKKQEAQKAKKQ 122
Query: 429 QPQA 440
+PQA
Sbjct: 123 EPQA 126
>UniRef50_A2YCL3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 105
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 84 TDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYS 260
+ +++W IYP YLNSKKT+A+GR++ +PT EI D + +E +K Y
Sbjct: 8 SSIKKWNVIYPVYLNSKKTVAEGRRIASGKACPDPTCVEIADCCSHLKIPHAIELDKAYP 67
Query: 261 RERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRES 362
R + GR+RVQLK DDG+PV P T +
Sbjct: 68 R----DFFQVGRVRVQLKKDDGSPVNPAIKTNST 97
>UniRef50_UPI0000499D1D Cluster: Signal recognition particle 19 kDa
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
Signal recognition particle 19 kDa protein - Entamoeba
histolytica HM-1:IMSS
Length = 122
Score = 70.5 bits (165), Expect = 2e-11
Identities = 38/120 (31%), Positives = 68/120 (56%)
Frame = +3
Query: 75 KKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKL 254
++ D RWI IYPAY++S+ T+AQGRK+ K ++ P +++ + +E +
Sbjct: 4 QQKVDTSRWIVIYPAYIDSELTIAQGRKVSKEVSVKQPNVFDLKKACETLKVNFVLEKQR 63
Query: 255 YSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRPAEQQP 434
YSR++ GR+R+QLK+++G + F R ++++ V ES+ K + A+ QP
Sbjct: 64 YSRQQ----WVMGRVRIQLKDENGVNI-TSFKNRITLIRAVAESV---KNAREEAAKAQP 115
>UniRef50_A0DTL4 Cluster: Chromosome undetermined scaffold_63, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_63,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 66.5 bits (155), Expect = 4e-10
Identities = 39/127 (30%), Positives = 66/127 (51%)
Frame = +3
Query: 69 PEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVEN 248
PE+ + + W IYP Y++S T AQGR+L KS C+ P EI L + GL+ ++
Sbjct: 4 PEQIKVESKTWKTIYPPYIDSTLTTAQGRRLGKSNCVPYPQLMEISQCLSSLGLRHVIDQ 63
Query: 249 KLYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRPAEQ 428
K++ +GRI+V+L +D P P+ + ++++ + + I K+ NR E
Sbjct: 64 ---HAGFPKDIFKQGRIKVRLYAEDKKPYNPQIKCKHTLLQTIAKLI---KSIPNRKVEV 117
Query: 429 QPQAANL 449
P A +
Sbjct: 118 PPYIAQM 124
>UniRef50_Q7YYK3 Cluster: SRP19-domain protein; n=3;
Cryptosporidium|Rep: SRP19-domain protein -
Cryptosporidium parvum
Length = 241
Score = 62.5 bits (145), Expect = 6e-09
Identities = 39/128 (30%), Positives = 63/128 (49%)
Frame = +3
Query: 30 YLLIMATLITSWNPEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRD 209
YL+ + I W P + + +V + + T + GR +C+E+PT EI +
Sbjct: 73 YLICLVRQIRVWGPREVNDNV----------VGNNNTKSSGRLSSLIHCVEDPTIAEIAE 122
Query: 210 VLLATGLQVGVENKLYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESI 389
V + G+ VE+K YS K+ GR+R QL ++ G T++ ++ +G I
Sbjct: 123 VCIQLGIPCKVESKRYS----KDCRTLGRVRFQLFDESGRAFNDRILTKKILLNQIGIMI 178
Query: 390 PKLKTRQN 413
PKLK RQN
Sbjct: 179 PKLKNRQN 186
>UniRef50_Q554G7 Cluster: Signal recognition particle 19 kDa
subunit; n=2; Dictyostelium discoideum|Rep: Signal
recognition particle 19 kDa subunit - Dictyostelium
discoideum AX4
Length = 178
Score = 61.7 bits (143), Expect = 1e-08
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +3
Query: 93 ERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERS 272
++W +YP ++NS+ T +GRK+ K + ++NPT EI + GL +E S+
Sbjct: 18 KKWYIVYPNHINSELTKEKGRKVSKEHGVKNPTLPEIAEATAQLGLPCIIET---SKGYP 74
Query: 273 KEMLYRGRIRVQLKNDDGT-PVKPEFPTRESVMKYVGESIPKLKTRQNRPAEQQP 434
KE RGR+R+ D T P P P + ++ + E I KL NRP P
Sbjct: 75 KEFFLRGRLRINFFCDGTTMPRNPHIPNKTVLLVKIAERI-KL-INPNRPEPFNP 127
>UniRef50_Q8I5P4 Cluster: Signal recognition particle 19 kd protein,
putative; n=4; Plasmodium|Rep: Signal recognition
particle 19 kd protein, putative - Plasmodium falciparum
(isolate 3D7)
Length = 152
Score = 59.3 bits (137), Expect = 6e-08
Identities = 33/105 (31%), Positives = 52/105 (49%)
Frame = +3
Query: 87 DVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRE 266
D RW IYP YLN KK + +GR++ YC+ +PT EI + +E K Y
Sbjct: 31 DYSRWKIIYPNYLNKKKKVNEGRRINLKYCVSDPTVDEIALACKELNVSYVIEKKKY--- 87
Query: 267 RSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLK 401
++ L GRIR++L N + + + +MK +G + +K
Sbjct: 88 YPRDWLIEGRIRIKLPNQNN-----DILNKFELMKKIGLKLQTIK 127
>UniRef50_A2FBB0 Cluster: SRP19 protein; n=1; Trichomonas vaginalis
G3|Rep: SRP19 protein - Trichomonas vaginalis G3
Length = 155
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +3
Query: 102 ICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERSKEM 281
I IYP Y++++ T QGRKLPK C++NP +EI + G + G+ + R+
Sbjct: 34 IFIYPCYIDNEMTEFQGRKLPKEQCVQNPFIEEISRAIFELGFE-GIYSMQKRHPRNFWK 92
Query: 282 LYRGRIRVQLKND---DGTPVKPEFPTRESVMKYVGESIPKLKTRQNRPAEQ 428
R I K++ + P+ P++P R+ V + + + I +++ + Q
Sbjct: 93 FGRAAITFYKKDEATGNRVPIYPQYPKRKDVYRAIAKKIVEIRANLSNKDRQ 144
>UniRef50_P41922 Cluster: Signal recognition particle SEC65 subunit;
n=1; Yarrowia lipolytica|Rep: Signal recognition
particle SEC65 subunit - Yarrowia lipolytica (Candida
lipolytica)
Length = 310
Score = 56.0 bits (129), Expect = 5e-07
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 66 NPEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE 245
N E + +D + W +YP Y + KT+ +GR++P +ENP Q I + L E
Sbjct: 110 NQEIQESDFKDWQIVYPVYFDKNKTVGEGRRVPLELAVENPLGQTIAEACKMLTLPSIYE 169
Query: 246 NKLYSRERSKEMLYRGRIRVQLKNDDGTPVKP-EFPTRESVMKYVGESIPKLKTRQNRP 419
+ K+ GR+RVQLK+D + P + + + + + + + T++ P
Sbjct: 170 ---AHKTHPKDWANPGRVRVQLKDDPALGLPPHSVKNKRHLFRLIAQYMKEHPTKEVTP 225
>UniRef50_Q4N9F1 Cluster: Signal recognition particle, putative;
n=2; Theileria|Rep: Signal recognition particle,
putative - Theileria parva
Length = 129
Score = 55.6 bits (128), Expect = 7e-07
Identities = 38/113 (33%), Positives = 55/113 (48%)
Frame = +3
Query: 72 EKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENK 251
+ D W IYP YL+ T +QGRK+ S + PT +EI+ V + VE K
Sbjct: 2 DSAEVDSSNWNIIYPTYLDKDCTSSQGRKINLSVAVSKPTIEEIKIVCEKLNIPHVVEEK 61
Query: 252 LYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQ 410
+ + + GR+RV L+ D T K T++ VM + I +LKTRQ
Sbjct: 62 ---KRYPRNWMVPGRVRVCLR-DSETNEKTR--TKKQVMCEIATLISQLKTRQ 108
>UniRef50_Q01H41 Cluster: Signal recognition particle, subunit
Srp19; n=2; Ostreococcus|Rep: Signal recognition
particle, subunit Srp19 - Ostreococcus tauri
Length = 306
Score = 54.0 bits (124), Expect = 2e-06
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +3
Query: 93 ERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVL-LATGLQVGVEN-KLYSRE 266
ER + P Y+++++T A+GRK+P + P EI GL+ +E K YSR+
Sbjct: 148 ERVVVCAP-YIDAERTRAEGRKIPTEDAVARPHVVEIAHACERGLGLRCEIEEEKCYSRD 206
Query: 267 RSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTR 407
RGR+RV ++D+G +PE TR ++K + + K R
Sbjct: 207 ----FWVRGRVRVTWRDDEGNLARPELDTRGKLLKAIAAEVKKYPER 249
>UniRef50_UPI00006CB16C Cluster: SRP19 protein; n=1; Tetrahymena
thermophila SB210|Rep: SRP19 protein - Tetrahymena
thermophila SB210
Length = 155
Score = 52.4 bits (120), Expect = 7e-06
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 99 WICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSRERSK 275
W +YP YL+S + +GR++ K+ + N T E+ L + V VE +K Y R
Sbjct: 14 WKTVYPHYLDSTLSQQEGRRVSKAVGVPNITIMEMAKALEKVKVPVVVEVHKSYPR---- 69
Query: 276 EMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRP 419
E + +GR++V L +D V P P+++ + + E + +L R P
Sbjct: 70 ETMIKGRVKVMLFDDSNKLVNPSVPSKKVLYAKICEYVKQLDDRIKNP 117
>UniRef50_Q6LY84 Cluster: Signal recognition particle protein SRP19;
n=2; Methanococcus|Rep: Signal recognition particle
protein SRP19 - Methanococcus maripaludis
Length = 89
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +3
Query: 102 ICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERSKEM 281
I ++PAY++ K+T +GRK+PK I+NP +EI + GL+ VENK + S E+
Sbjct: 4 IILWPAYIDLKRTKNEGRKVPKEIAIQNPKLKEIASKIKKMGLEYSVENKKSYPKESWEI 63
Query: 282 LYRGRIRVQL 311
G I+V++
Sbjct: 64 C--GYIKVKV 71
>UniRef50_A3BBG2 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 70
Score = 35.9 bits (79), Expect(2) = 6e-05
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 249 KLYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRES 362
K + ++ GR+RVQLK DDG+PV P T +
Sbjct: 25 KTLDKAYPRDFFQVGRVRVQLKKDDGSPVNPAIKTNST 62
Score = 33.1 bits (72), Expect(2) = 6e-05
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 84 TDVERWICIYPAYLNSKKTL 143
+ +++W IYP YLNSKKTL
Sbjct: 8 SSIKKWNVIYPVYLNSKKTL 27
>UniRef50_Q0V1U5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 278
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +3
Query: 45 ATLITSWNPE-KKHTDVE---RWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDV 212
A L+ +P K TD E + CIYP Y + +T A+GR++ + +ENP +E+ D
Sbjct: 76 AHLLQPQSPSIKTSTDRESSKHYQCIYPIYFDKARTRAEGRRVGQELAVENPLAREMADA 135
Query: 213 LLATGLQVGVENKLYSRERSKEMLYRGRIRVQLKND 320
GL+ E + K GR+RV LK D
Sbjct: 136 AANLGLRTVFEP---DKTHPKNWENPGRVRVLLKQD 168
>UniRef50_A4FX62 Cluster: Ribonucleoprotein complex SRP, Srp19
component; n=3; Methanococcus|Rep: Ribonucleoprotein
complex SRP, Srp19 component - Methanococcus maripaludis
Length = 89
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +3
Query: 108 IYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENK 251
I+PAY++ K+T +GRK+PK + ++NP ++I L GL+ +E+K
Sbjct: 6 IWPAYIDLKRTKNEGRKVPKEFAVQNPKLKDIAGKLKKMGLEYSIEHK 53
>UniRef50_Q8SRC3 Cluster: Signal recognition particle SEC65 subunit;
n=1; Encephalitozoon cuniculi|Rep: Signal recognition
particle SEC65 subunit - Encephalitozoon cuniculi
Length = 137
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +3
Query: 105 CIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERSKEML 284
C+YP Y++S ++L++GRK K C++ P + EI++ L ++ E S++ ++
Sbjct: 7 CLYPIYMDSARSLSEGRKYRKEICVQRPRYHEIKNALEKLEIEYTDEP---SKKHPRDFF 63
Query: 285 YRGRIRVQ 308
GR R++
Sbjct: 64 NSGRFRIK 71
>UniRef50_A7AVA7 Cluster: Signal recognition particle SRP19 subunit;
n=1; Babesia bovis|Rep: Signal recognition particle
SRP19 subunit - Babesia bovis
Length = 129
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 90 VERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSRE 266
+ W +YP Y + K T++ GR++ K+ +E+P+ ++IR V + VE +K+Y R
Sbjct: 10 ISTWTILYPTYFDKKATVSGGRRVNKTLAVEDPSVEDIRIVCEKLKVPYKVERHKIYPR- 68
Query: 267 RSKEMLYRGRIRV 305
+ L GRIRV
Sbjct: 69 ---DFLNPGRIRV 78
>UniRef50_A4R4M6 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 273
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +3
Query: 105 CIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERSKEML 284
C+YP Y ++ +T A+GR++ +S + NP +EI LQ E ++ ++
Sbjct: 75 CLYPVYFDATRTRAEGRRVKRSEAVPNPLAREIAQACGNLQLQALFEP---TKTHPRDWA 131
Query: 285 YRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNR----PAEQQPQA 440
GR++V++K VK + V K++ E+ R R P Q P+A
Sbjct: 132 NPGRVKVKVKGSGNQHVKNKHHLYLLVAKHLRENPATENCRALRSVAVPGLQMPEA 187
>UniRef50_Q4P7D0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 376
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +3
Query: 75 KKHTDVERWICIYPAYLNSKKTLAQG-RKLPKSYCIENPTHQEIRDVLLATGLQVGVENK 251
K + ++W+ IYP Y ++K+ +G R++ PT I + L+ V+
Sbjct: 77 KDDGEFKKWVSIYPIYFDAKRHYGKGCRRVSYEKSSAFPTQLWIAKAVGRLELKY-VQEP 135
Query: 252 LYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESI 389
+ + E GR++VQL NDDG P+ +++ + V E+I
Sbjct: 136 FKTHPQDWEN--PGRVKVQLFNDDGEPINSRLASKKQLFDAVAETI 179
>UniRef50_P29478 Cluster: Signal recognition particle subunit SEC65;
n=5; Saccharomycetaceae|Rep: Signal recognition particle
subunit SEC65 - Saccharomyces cerevisiae (Baker's yeast)
Length = 273
Score = 42.7 bits (96), Expect = 0.005
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +3
Query: 72 EKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENK 251
+K +V+R+ +YP Y + ++ +GR++PK +ENP + + D + G+ E +
Sbjct: 89 KKDLEEVKRFQVLYPCYFDINRSHKEGRRVPKELAVENPLAKTMADAVRELGILCIFEGE 148
Query: 252 LYSRERSKEMLYRGRIRVQLKNDD---GTPVKPEFPTRESVMKYVGESIPKLKT 404
+ ++ GRIRV K + G K + R+ +MK VGE + + T
Sbjct: 149 ---KCHPQDFGNPGRIRVLFKENGQLIGAATKFKGGKRQ-LMKAVGEYMKRHPT 198
>UniRef50_O14415 Cluster: Signal recognition particle SEC65 subunit;
n=8; Saccharomycetales|Rep: Signal recognition particle
SEC65 subunit - Candida albicans (Yeast)
Length = 275
Score = 42.7 bits (96), Expect = 0.005
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +3
Query: 72 EKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENK 251
EKK D ++ IYP Y + ++ QGR++ +ENP I D GL V +E
Sbjct: 86 EKKQFD--QFQIIYPCYFDINRSHKQGRRVSIDRAVENPLATTISDACRRLGLPVFLE-- 141
Query: 252 LYSRERSKEMLYRGRIRVQLKN--DDGTPVKPEFPTRESVMKYVGESIPKLKT 404
+ ++ GR++V K D+G + P+ T+ + + E + + T
Sbjct: 142 -LDKTHPQDFGNPGRVKVLFKAVFDNGKLINPKLQTKRVLFNVIAEYLSEHPT 193
>UniRef50_O26267 Cluster: Signal recognition particle 19 kDa
protein; n=1; Methanothermobacter thermautotrophicus
str. Delta H|Rep: Signal recognition particle 19 kDa
protein - Methanobacterium thermoautotrophicum
Length = 91
Score = 42.3 bits (95), Expect = 0.007
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 102 ICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVEN 248
+ I+P YL+S+K+ ++GR++P Y +E+PT EI L+ +E+
Sbjct: 3 LIIWPTYLDSRKSRSEGRRVPLEYAVESPTASEILRAARKLQLEASMES 51
>UniRef50_Q58440 Cluster: Signal recognition particle 19 kDa
protein; n=1; Methanocaldococcus jannaschii|Rep: Signal
recognition particle 19 kDa protein - Methanococcus
jannaschii
Length = 87
Score = 42.3 bits (95), Expect = 0.007
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 108 IYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGV-ENKLYSRE 266
I+P+Y++ KK+ +GRK+P+ IE P+ ++I L GL+ + +K Y R+
Sbjct: 3 IWPSYIDKKKSRREGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPRQ 56
>UniRef50_Q5V5S9 Cluster: Signal recognition particle 19 kDa
protein; n=2; Haloarcula marismortui|Rep: Signal
recognition particle 19 kDa protein - Haloarcula
marismortui (Halobacterium marismortui)
Length = 92
Score = 41.9 bits (94), Expect = 0.010
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 108 IYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSRERSKEML 284
I+PA L++ ++ + GR++ +ENPT EI + G +E +K Y RE
Sbjct: 6 IWPAALDANRSRSDGRRVSLDLAVENPTVDEIAKAVQQVGYDAVIERDKTYPRE------ 59
Query: 285 YRGRIRVQLKN-DDGT 329
Y GR RV +K+ DD T
Sbjct: 60 YEGRGRVVVKDADDAT 75
>UniRef50_Q5KAC1 Cluster: Signal recognition particle protein,
putative; n=1; Filobasidiella neoformans|Rep: Signal
recognition particle protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 355
Score = 41.5 bits (93), Expect = 0.013
Identities = 24/97 (24%), Positives = 47/97 (48%)
Frame = +3
Query: 99 WICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERSKE 278
W +YP Y ++K ++ GR++P++ + P +I + + GL +E + R +
Sbjct: 142 WNVVYPLYFDAKVSINSGRRVPRTSAVWWPIATQIAEACKSLGLPSVLEPE---RCHPAD 198
Query: 279 MLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESI 389
GR++VQ DG + P R + K++ + I
Sbjct: 199 WENPGRVKVQFVK-DGRFINPIIKNRTQLYKHISDQI 234
>UniRef50_Q8WZS0 Cluster: Related to signal recognition particle
protein Sec65; n=2; Sordariales|Rep: Related to signal
recognition particle protein Sec65 - Neurospora crassa
Length = 366
Score = 41.1 bits (92), Expect = 0.017
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 105 CIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSRERSKEM 281
C+YP Y ++ ++ A+GR++ K + NP EI + L V +E KL+ K+
Sbjct: 125 CLYPCYFDATRSRAEGRRVSKELAVPNPLATEIVNACAQLRLSVVLEAGKLH----PKDW 180
Query: 282 LYRGRIRVQLK 314
GR++V LK
Sbjct: 181 ANPGRVKVNLK 191
>UniRef50_A2DEL3 Cluster: SRP19 protein; n=1; Trichomonas vaginalis
G3|Rep: SRP19 protein - Trichomonas vaginalis G3
Length = 125
Score = 40.7 bits (91), Expect = 0.022
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Frame = +3
Query: 96 RWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERSK 275
R +C YP Y++S GRK+ K C+E PT +E+ G G E + +
Sbjct: 5 RIVC-YPCYIDSTTKEFDGRKISKELCVEKPTIKELILAFKDCGF-TGKEEA--DKTHPR 60
Query: 276 EMLYRGRIRVQL-----KNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRPAEQQPQA 440
+ GR+ + + T + P + R+S+ + I + + QQP
Sbjct: 61 DFFRSGRVSIDFYSINEETKKKTLLNPNYKNRKSIYAALAAKIKENRANNRTSEVQQPSK 120
Query: 441 AN 446
N
Sbjct: 121 KN 122
>UniRef50_Q8TV49 Cluster: Signal recognition particle 19 kDa
protein; n=1; Methanopyrus kandleri|Rep: Signal
recognition particle 19 kDa protein - Methanopyrus
kandleri
Length = 103
Score = 40.3 bits (90), Expect = 0.029
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 102 ICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSR 263
I ++PAY ++ ++ ++GRK+PK + NP E+R + GL V+ +K Y +
Sbjct: 15 IVVWPAYFDADRSRSEGRKVPKRLAVRNPRLTELRHIAEKLGLNPKVQRDKRYPK 69
>UniRef50_UPI00015BB03D Cluster: signal recognition particle,
subunit SRP19 (srp19); n=1; Ignicoccus hospitalis
KIN4/I|Rep: signal recognition particle, subunit SRP19
(srp19) - Ignicoccus hospitalis KIN4/I
Length = 99
Score = 39.5 bits (88), Expect = 0.051
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 96 RWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRE 266
+++ ++P Y +S + +GR++P+ + P+ +E+ +V A GL+ Y RE
Sbjct: 9 KYVILWPQYFDSSLSRKEGRRVPRELAVARPSQKELLEVAAALGLEAKPLEGKYPRE 65
>UniRef50_A0RXG6 Cluster: Signal recognition particle, 19 kDa
protein; n=2; Thermoprotei|Rep: Signal recognition
particle, 19 kDa protein - Cenarchaeum symbiosum
Length = 101
Score = 38.7 bits (86), Expect = 0.089
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 102 ICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENK 251
+ ++ Y N T ++GR+L + C+ +P+ +E+ D A GL+V N+
Sbjct: 7 VVVWLDYFNKNLTRSKGRRLGRERCVFDPSFKELADAAAAAGLEVSESNE 56
>UniRef50_A6RJV5 Cluster: Signal recognition particle protein Sec65;
n=2; Sclerotiniaceae|Rep: Signal recognition particle
protein Sec65 - Botryotinia fuckeliana B05.10
Length = 283
Score = 37.5 bits (83), Expect = 0.20
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = +3
Query: 48 TLITSWNPEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATG 227
T S K+ D + CIYP Y ++ ++ A+GR++ ++NP +EI +A
Sbjct: 82 TQFRSTEDSSKYKDFQ---CIYPIYFDATRSRAEGRRVGMELAVKNPVAREI----VAAC 134
Query: 228 LQVGVENKLYS-RERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGES 386
++ +E + K+ GR++V ++ + T +K + + K++ E+
Sbjct: 135 SRLRIETLFEPVKTHPKDWANPGRVKVNIRGGN-TTIKNKHHLYTMIAKHLKEN 187
>UniRef50_UPI0000583E12 Cluster: PREDICTED: hypothetical protein; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1167
Score = 37.1 bits (82), Expect = 0.27
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +3
Query: 108 IYPAYLNSKKTL-AQGRKLPKSYCIENPTHQEIRDVLLATGLQ---VGVENKLYSRERSK 275
I+P L S K + + RK+ S C+E + E +++L+ +GVE Y +
Sbjct: 766 IFPTILKSLKEMHTEARKMATS-CLERISGSETQELLIEDDTMAKVLGVETGRYRFKNPS 824
Query: 276 EMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNRPAEQQP 434
E +R+ + + +K + + V + VGE++ + K R PA +P
Sbjct: 825 EDALPKTVRLLSRKQEAVLIKDKEQKQPRVAESVGEALQR-KRRMGSPARSEP 876
>UniRef50_Q6PW22 Cluster: Signal recognition particle protein SRP19;
n=7; Trypanosomatidae|Rep: Signal recognition particle
protein SRP19 - Trypanosoma brucei
Length = 152
Score = 37.1 bits (82), Expect = 0.27
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 69 PEKKHTDVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATG 227
P + D + IYP YL+++ T GR+L ++ +++PT +E+ + L G
Sbjct: 3 PSQPSYDKRAYQTIYPQYLDAELTPHDGRRLTRTQAVDDPTTKEVVEALKELG 55
>UniRef50_P46030 Cluster: Peptide transporter PTR2; n=5;
Saccharomycetales|Rep: Peptide transporter PTR2 -
Candida albicans (Yeast)
Length = 623
Score = 36.7 bits (81), Expect = 0.36
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = -1
Query: 427 CSAGLFCLVFNLGIDSPTYFITDSLVGNSGFTGVPSSFFN*TRILPLYNISLLRSLEYNL 248
C L+ ++FNL DS + SL+G GVP+ FN PL I L+ LEY L
Sbjct: 378 CKIFLYYIIFNLA-DSGLGSVETSLIGAMKLDGVPNDLFN--NFNPLTIIILIPILEYGL 434
Query: 247 F 245
+
Sbjct: 435 Y 435
>UniRef50_Q2NF32 Cluster: Signal recognition particle 19 kDa
protein; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Signal recognition particle 19 kDa protein -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 92
Score = 36.3 bits (80), Expect = 0.47
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 IYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLY 257
I+P Y+NS+ + +GRKL +E P +EI L +Q VE NK Y
Sbjct: 5 IWPTYINSEHSRGEGRKLSLEESVEEPKIREISQSLKKLKIQYVVEHNKSY 55
>UniRef50_O29010 Cluster: Signal recognition particle 19 kDa
protein; n=1; Archaeoglobus fulgidus|Rep: Signal
recognition particle 19 kDa protein - Archaeoglobus
fulgidus
Length = 104
Score = 35.9 bits (79), Expect = 0.63
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 108 IYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSR 263
++ L+SKK+ A+GR++P+ + + N E+ + GL+ E K Y +
Sbjct: 6 VWTVNLDSKKSRAEGRRIPRRFAVPNVKLHELVEACKELGLKFRAEEKKYPK 57
>UniRef50_Q8XZ52 Cluster: Putative integrase/recombinase protein;
n=1; Ralstonia solanacearum|Rep: Putative
integrase/recombinase protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 354
Score = 35.5 bits (78), Expect = 0.83
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 288 RGRIRVQLK-NDDGTPVKPE-FPTRESVMKYVGESIPKLKTRQNRPAEQQPQA 440
RG +R Q K G P+ + FP+RE ++ + P+L+ R + A QQ QA
Sbjct: 11 RGEVRFQAKIRRTGVPIASKVFPSREEAEAWIQATEPELQARSRQAARQQAQA 63
>UniRef50_A4VDB1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 140
Score = 35.1 bits (77), Expect = 1.1
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = -2
Query: 540 YYFIGIFEINLL*NIYYFLIDVLFYSSYY*TGLLLEVVVR--LVCFVLSSIWVLTLQHI- 370
++FI +F ++LL I YFL+ + Y S Y T L ++++ LV FV ++ +Q +
Sbjct: 10 FFFIVLFLLDLLLQITYFLLILFKYFSIYYTKLTFNIILQFNLVTFVFQELFNFLVQLVT 69
Query: 369 SXXXXXXXXXXXXECHHHFLIELEFSLYITFPCSVLWNTIYFRHPLASQLPTKHL 205
+ + F + +F + I F +LW T+ Q+ K L
Sbjct: 70 NVLKFLKQTLINKFWNWQFYLAKKFHI-IIFQMHLLWITLILNFLFIRQIIFKVL 123
>UniRef50_A2BJ20 Cluster: Signal recognition particle 19 kDa
protein; n=2; Desulfurococcales|Rep: Signal recognition
particle 19 kDa protein - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 103
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 96 RWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSR 263
R I ++PA ++S + ++GRK+P + P +EI + GL VE Y R
Sbjct: 8 RRIVLWPANIDSTLSRSEGRKIPLRDAVRKPRVEEIVEAANRLGLNPTVEEAAYPR 63
>UniRef50_Q9YDZ7 Cluster: Signal recognition particle 19 kDa
protein; n=1; Aeropyrum pernix|Rep: Signal recognition
particle 19 kDa protein - Aeropyrum pernix
Length = 112
Score = 34.7 bits (76), Expect = 1.4
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 96 RWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSR 263
R I ++PAY +S GR++P+ + +P +++ + G + VE Y R
Sbjct: 16 RRIILWPAYFDSTLPRRLGRRVPRDMGVPSPKPEDVAEAARRAGFEAVVEESSYPR 71
>UniRef50_A7IAR2 Cluster: Ribonucleoprotein complex SRP, Srp19
component; n=1; Candidatus Methanoregula boonei 6A8|Rep:
Ribonucleoprotein complex SRP, Srp19 component -
Methanoregula boonei (strain 6A8)
Length = 91
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 90 VERWICI-YPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE 245
+E+ CI YP Y N+ + A+GR++P++ + P ++ L G+ E
Sbjct: 1 MEKGECILYPCYFNAALSRAEGRRVPRNIAAKGPNANDVERALRRLGIACQAE 53
>UniRef50_A5UNC8 Cluster: Signal recognition particle, subunit
SRP19; n=1; Methanobrevibacter smithii ATCC 35061|Rep:
Signal recognition particle, subunit SRP19 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 89
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 102 ICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENK 251
I ++P YL+ +L +GRK+ K +E P Q+I L L + +
Sbjct: 2 ITVWPQYLDKNLSLNEGRKVSKEIAVEEPKLQDIEKALKRLNLPYSTQKE 51
>UniRef50_UPI0000E488D0 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 145
Score = 33.1 bits (72), Expect = 4.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 85 PMLKDGYAFIQLTLTARKH*LKDENYLNLTVLKTPH 192
P+L G IQ ++H +KD+N L LT+ TPH
Sbjct: 110 PILNSGNTVIQAVRVLQEHGVKDKNILLLTLFCTPH 145
>UniRef50_Q5AJA7 Cluster: Potential fungal zinc cluster transcription
factor; n=3; Candida albicans|Rep: Potential fungal zinc
cluster transcription factor - Candida albicans (Yeast)
Length = 1050
Score = 33.1 bits (72), Expect = 4.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 394 LGIDSPTYFITDSLVGNSGFTGVPSSFFN 308
L + + T F+ D GN+G TGV SSFFN
Sbjct: 1012 LSLFNATNFVDDQTDGNNGATGVGSSFFN 1040
>UniRef50_Q6T8F8 Cluster: RepC; n=1; Chlamydia suis|Rep: RepC -
Chlamydia suis
Length = 330
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +3
Query: 204 RDVLLATGLQVGVENKLYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGE 383
+ +LLA Q+G++ + + E+ + R+ + NDDG P+K + + S++ G
Sbjct: 59 QSILLAVSAQLGIDGLMIEAKPPGEIGQQLRLALDFDNDDGRPLKTKKTSLRSLLIDAGY 118
Query: 384 SIPK 395
P+
Sbjct: 119 DDPE 122
>UniRef50_Q7RBX7 Cluster: Drosophila melanogaster LD30622p-related;
n=3; Plasmodium (Vinckeia)|Rep: Drosophila melanogaster
LD30622p-related - Plasmodium yoelii yoelii
Length = 926
Score = 32.7 bits (71), Expect = 5.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 246 NKLYSRERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKY 374
NK+Y +++ ++ I++QL + K FPT+E ++ Y
Sbjct: 115 NKIYQNDKNNIFIFNNNIKLQLNKEKELYEKKLFPTKEGILCY 157
>UniRef50_Q8TTY3 Cluster: Signal recognition particle 19 kDa
protein; n=6; Methanosarcinaceae|Rep: Signal recognition
particle 19 kDa protein - Methanosarcina acetivorans
Length = 101
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 102 ICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSR 263
+ I+PAY++ ++ + GR + + ++ P EI+D GL VE K Y +
Sbjct: 7 LVIWPAYIDQTRSRSNGRIISRKNAVKEPHLNEIKDAAKNLGLNPEVEPEKAYPK 61
>UniRef50_Q2GCM3 Cluster: Strain-specific surface antigen; n=1;
Neorickettsia sennetsu str. Miyayama|Rep:
Strain-specific surface antigen - Neorickettsia sennetsu
(strain Miyayama)
Length = 332
Score = 32.3 bits (70), Expect = 7.7
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +3
Query: 180 ENPTHQEIRDVLLATGLQVGVENKLYSRERSKEMLYRGRIRVQLKNDDGTPVKPE 344
E+P ++EI+D+L+ + ENK S E+ KE L G ++ +L +D PVK E
Sbjct: 182 ESPGNEEIKDILINGNFEASFENK-ESAEKLKETLTGGTVK-KLFSD---PVKAE 231
>UniRef50_Q625S7 Cluster: Putative uncharacterized protein CBG01154;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG01154 - Caenorhabditis
briggsae
Length = 326
Score = 32.3 bits (70), Expect = 7.7
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = -2
Query: 531 IGIFEINLL*NIYYFLIDVLFYSSYY*TGLL-LEVVVRLVCFV-LSSIWVLTLQHISXXX 358
I ++N++ ++Y + D L Y SY GLL ++ V L F+ L ++ + ++ +
Sbjct: 171 IDSMKLNIIAAVFYEVPDGLEYRSYASIGLLTIQSVTSLTLFITLGTMTIRSINRLKFNM 230
Query: 357 XXXXXXXXXECHHHFLIELEFSLYITF-PCSVLWNTIYFRHPLAS 226
+ I+ ++I+F PC+V W + F L S
Sbjct: 231 SDKTKILQRQLMKALAIQTIIPIFISFSPCAVSWYSPIFNIDLGS 275
>UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1;
Tribolium castaneum|Rep: Gustatory receptor candidate 19
- Tribolium castaneum (Red flour beetle)
Length = 355
Score = 32.3 bits (70), Expect = 7.7
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Frame = -2
Query: 525 IFEINLL*NIYYF----LIDVLFYSSYY*TGLLLEVVVRLVC---FVLSSIWVLTLQHI- 370
IF ++ L YYF +I + Y YY + ++ L+C FV+ ++L + +
Sbjct: 91 IFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150
Query: 369 -SXXXXXXXXXXXXECHHHFLIELEFSLYITFPCSVLWNTIYFRHPLASQLPTKHL*F-P 196
+ +H F + F++++ F C+ ++ ++ L T HL F P
Sbjct: 151 CAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLP 210
Query: 195 DVWGFQYSKI*VVFVLELMFSC 130
++ F YS ++F + L+F C
Sbjct: 211 CIYYF-YSAF-IIFTIHLLFYC 230
>UniRef50_Q9HQ21 Cluster: Signal recognition particle 19 kDa
protein; n=4; Halobacteriaceae|Rep: Signal recognition
particle 19 kDa protein - Halobacterium salinarium
(Halobacterium halobium)
Length = 92
Score = 32.3 bits (70), Expect = 7.7
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 108 IYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVENKLYSRERSKEMLY 287
I+PAY ++ + GR++P +E P+ EI + G VE + R +
Sbjct: 6 IWPAYFDAALSRRDGRRVPMELAVEEPSIDEIATAVQQVGYDAVVERDVAYPRRHWDA-- 63
Query: 288 RGRIRVQLKND 320
GR+ V+ +D
Sbjct: 64 AGRVLVKDADD 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,978,658
Number of Sequences: 1657284
Number of extensions: 9807627
Number of successful extensions: 24721
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 24111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24697
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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