BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_N02
(553 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 31 0.033
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 24 2.9
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 6.7
AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsiv... 23 6.7
AY745213-1|AAU93480.1| 171|Anopheles gambiae cytochrome P450 pr... 23 8.8
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 30.7 bits (66), Expect = 0.033
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 280 ISLLRSLEYNLFSTPTCKPVANKTS 206
I L +EYN+F P C PV+N T+
Sbjct: 217 IELAADVEYNVFVAPICLPVSNDTA 241
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 24.2 bits (50), Expect = 2.9
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +1
Query: 205 EMFCWQLA---CKWVSKINCIPENGARKCY 285
E+ CW C+ SK+NC P+ +C+
Sbjct: 165 EVGCWGEGAHNCQRFSKLNCSPQCSQGRCF 194
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 285 YRGRIRVQLKNDDGTPV 335
Y GR V+L ND TPV
Sbjct: 94 YEGRWSVELINDRNTPV 110
>AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsive
protein 1 protein.
Length = 447
Score = 23.0 bits (47), Expect = 6.7
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 355 LVGNSGFTGVP 323
LVG+SG TGVP
Sbjct: 313 LVGDSGITGVP 323
>AY745213-1|AAU93480.1| 171|Anopheles gambiae cytochrome P450
protein.
Length = 171
Score = 22.6 bits (46), Expect = 8.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 174 CIENPTHQEIRDVLLATGLQVGVENKLYSRERSKEMLYRGRI 299
C+ H EI+D A ++ ++ Y+ E K+M Y R+
Sbjct: 66 CLLLAMHPEIQDRAAAEICELLADDVEYTHETLKQMEYLERV 107
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,223
Number of Sequences: 2352
Number of extensions: 10713
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -