Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_N02
(553 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X12791-1|CAA31280.1| 144|Homo sapiens protein ( Human mRNA for ... 136 4e-32
BC010947-1|AAH10947.1| 144|Homo sapiens signal recognition part... 136 4e-32
BC017830-1|AAH17830.1| 110|Homo sapiens SRP19 protein protein. 111 2e-24
BC040481-1|AAH40481.1| 873|Homo sapiens zinc fingers and homeob... 30 4.7
AF195766-1|AAF35183.1| 873|Homo sapiens ZHX1 protein protein. 30 4.7
AF106862-1|AAD50624.1| 873|Homo sapiens zinc finger homeobox pr... 30 4.7
J03600-1|AAA36183.1| 674|Homo sapiens protein ( Human lipoxygen... 29 8.2
J03571-1|AAA65450.1| 674|Homo sapiens 5-lipoxygenase protein. 29 8.2
BC132677-1|AAI32678.1| 674|Homo sapiens arachidonate 5-lipoxyge... 29 8.2
BC130332-1|AAI30333.1| 674|Homo sapiens arachidonate 5-lipoxyge... 29 8.2
AL731567-1|CAI41243.1| 674|Homo sapiens arachidonate 5-lipoxyge... 29 8.2
>X12791-1|CAA31280.1| 144|Homo sapiens protein ( Human mRNA for
19kD protein of signal recognition particle (SRP). ).
Length = 144
Score = 136 bits (330), Expect = 4e-32
Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Frame = +3
Query: 87 DVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSR 263
D +R+ICIYPAYLN+KKT+A+GR++P S +ENPT EI+DV A GL V +E NK+YSR
Sbjct: 11 DQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSR 70
Query: 264 ERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNR 416
E ++++ YRGR+RVQLK +DG+ +FP+R+SVM Y E IPKLKTR +
Sbjct: 71 EWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 121
>BC010947-1|AAH10947.1| 144|Homo sapiens signal recognition
particle 19kDa protein.
Length = 144
Score = 136 bits (330), Expect = 4e-32
Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Frame = +3
Query: 87 DVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSR 263
D +R+ICIYPAYLN+KKT+A+GR++P S +ENPT EI+DV A GL V +E NK+YSR
Sbjct: 11 DQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSR 70
Query: 264 ERSKEMLYRGRIRVQLKNDDGTPVKPEFPTRESVMKYVGESIPKLKTRQNR 416
E ++++ YRGR+RVQLK +DG+ +FP+R+SVM Y E IPKLKTR +
Sbjct: 71 EWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 121
>BC017830-1|AAH17830.1| 110|Homo sapiens SRP19 protein protein.
Length = 110
Score = 111 bits (266), Expect = 2e-24
Identities = 51/90 (56%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Frame = +3
Query: 87 DVERWICIYPAYLNSKKTLAQGRKLPKSYCIENPTHQEIRDVLLATGLQVGVE-NKLYSR 263
D +R+ICIYPAYLN+KKT+A+GR++P S +ENPT EI+DV A GL V +E NK+YSR
Sbjct: 11 DQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSR 70
Query: 264 ERSKEMLYRGRIRVQLKNDDGTPVKPEFPT 353
E ++++ YRGR+RVQLK +DG+ +FP+
Sbjct: 71 EWNRDVQYRGRVRVQLKQEDGSLCLVQFPS 100
>BC040481-1|AAH40481.1| 873|Homo sapiens zinc fingers and
homeoboxes 1 protein.
Length = 873
Score = 30.3 bits (65), Expect = 4.7
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +3
Query: 123 LNSKKTLAQGRKLPKSYCIEN-PTHQEIRDVLLATGLQVGVENKLYSRERSKEMLYRGRI 299
+ +KKT Q +L SY P EI ++ TGL G K +S R + +
Sbjct: 467 IRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQ 526
Query: 300 RVQLKNDDGTPVKPEFPTRESVMKYVGESIPK 395
+ L ND T + + + VG + PK
Sbjct: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQPK 558
>AF195766-1|AAF35183.1| 873|Homo sapiens ZHX1 protein protein.
Length = 873
Score = 30.3 bits (65), Expect = 4.7
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +3
Query: 123 LNSKKTLAQGRKLPKSYCIEN-PTHQEIRDVLLATGLQVGVENKLYSRERSKEMLYRGRI 299
+ +KKT Q +L SY P EI ++ TGL G K +S R + +
Sbjct: 467 IRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQ 526
Query: 300 RVQLKNDDGTPVKPEFPTRESVMKYVGESIPK 395
+ L ND T + + + VG + PK
Sbjct: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQPK 558
>AF106862-1|AAD50624.1| 873|Homo sapiens zinc finger homeobox
protein ZHX1 protein.
Length = 873
Score = 30.3 bits (65), Expect = 4.7
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +3
Query: 123 LNSKKTLAQGRKLPKSYCIEN-PTHQEIRDVLLATGLQVGVENKLYSRERSKEMLYRGRI 299
+ +KKT Q +L SY P EI ++ TGL G K +S R + +
Sbjct: 467 IRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQ 526
Query: 300 RVQLKNDDGTPVKPEFPTRESVMKYVGESIPK 395
+ L ND T + + + VG + PK
Sbjct: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQPK 558
>J03600-1|AAA36183.1| 674|Homo sapiens protein ( Human lipoxygenase
mRNA, complete cds. ).
Length = 674
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 112 IQLT-LTARKH*LKDENYLNLTVLKTPHIRKLEMFCWQ 222
IQL + RK+ L D+ YL LKTPH +E C++
Sbjct: 65 IQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR 102
>J03571-1|AAA65450.1| 674|Homo sapiens 5-lipoxygenase protein.
Length = 674
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 112 IQLT-LTARKH*LKDENYLNLTVLKTPHIRKLEMFCWQ 222
IQL + RK+ L D+ YL LKTPH +E C++
Sbjct: 65 IQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR 102
>BC132677-1|AAI32678.1| 674|Homo sapiens arachidonate
5-lipoxygenase protein.
Length = 674
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 112 IQLT-LTARKH*LKDENYLNLTVLKTPHIRKLEMFCWQ 222
IQL + RK+ L D+ YL LKTPH +E C++
Sbjct: 65 IQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR 102
>BC130332-1|AAI30333.1| 674|Homo sapiens arachidonate
5-lipoxygenase protein.
Length = 674
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 112 IQLT-LTARKH*LKDENYLNLTVLKTPHIRKLEMFCWQ 222
IQL + RK+ L D+ YL LKTPH +E C++
Sbjct: 65 IQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR 102
>AL731567-1|CAI41243.1| 674|Homo sapiens arachidonate
5-lipoxygenase protein.
Length = 674
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 112 IQLT-LTARKH*LKDENYLNLTVLKTPHIRKLEMFCWQ 222
IQL + RK+ L D+ YL LKTPH +E C++
Sbjct: 65 IQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,944,900
Number of Sequences: 237096
Number of extensions: 1552678
Number of successful extensions: 2815
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2812
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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