Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M24
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   6.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 505 IHLQTYIYTQVVSCLYIEYYIML 573
           IHL  Y    ++ C+Y  YY  +
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFI 246


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 462 SKRVSKYFLTSNYFRIH 412
           SK  S+Y   SN+F+IH
Sbjct: 72  SKSGSRYGRRSNWFKIH 88


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 428 LDVKKYFETLFDCKI 472
           L+++KY+  L+ C+I
Sbjct: 324 LEIEKYYNILYFCRI 338


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 310 IQLTPTQLAYS*MTHSFICKRA 375
           I+LTPTQ+      H +  KRA
Sbjct: 77  IRLTPTQVKIWFQNHRYKTKRA 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,873
Number of Sequences: 336
Number of extensions: 2916
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)