Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M24
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ...    31   0.84 
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ...    31   0.84 

>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
           protein C44E4.1a protein.
          Length = 2712

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 480 WWKILQSKRVSKYFLTSNYFRIHE 409
           +WK+L+++  SK+F T  Y RI++
Sbjct: 31  YWKLLKNQTFSKFFATMQYIRIYD 54


>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
           protein C44E4.1c protein.
          Length = 2710

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 480 WWKILQSKRVSKYFLTSNYFRIHE 409
           +WK+L+++  SK+F T  Y RI++
Sbjct: 31  YWKLLKNQTFSKFFATMQYIRIYD 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,105,610
Number of Sequences: 27780
Number of extensions: 259574
Number of successful extensions: 343
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)