Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M23
(503 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0373 + 23581812-23583293 34 0.075
12_02_0971 + 24949137-24950534 32 0.30
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 30 1.2
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 29 1.6
09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503 29 2.1
04_01_0316 + 4251465-4251590,4251664-4251719,4252973-4253087,425... 29 2.1
04_01_0226 + 2842897-2842921,2843049-2843155,2843426-2843494,285... 29 2.1
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 28 3.7
04_04_0815 - 28269918-28270022,28270164-28270226,28270342-282704... 28 3.7
04_03_0611 - 18011469-18012563,18012756-18012920,18013542-180136... 28 3.7
04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,174... 28 4.9
03_05_0233 - 22182565-22182897,22183025-22183193,22183287-221835... 28 4.9
02_05_0053 - 25442186-25443189,25444359-25444914 27 6.5
11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475 27 8.6
11_01_0673 - 5491694-5493102,5493386-5493995 27 8.6
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 27 8.6
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 27 8.6
03_05_1069 + 30118930-30120120 27 8.6
>03_05_0373 + 23581812-23583293
Length = 493
Score = 33.9 bits (74), Expect = 0.075
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 326 GHVVGLGRSGTLFVTGHSSGVVRIWDEKP--VDFQAGAKLDRLRVCEDDQGLLATGGEE 496
GHV L +G + TG S VR+W ++ F+ G+ L + V DD G + TG ++
Sbjct: 108 GHVYSLAAAGDVLYTGTDSENVRVWRDRRELAGFRTGSGLVKAIVVADD-GRIFTGHQD 165
>12_02_0971 + 24949137-24950534
Length = 465
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 326 GHVVGLGRSGTLFVTGHSSGVVRIWDEKP--VDFQAGAKLDRLRVCEDDQGLLATGGEE 496
GHV L +G L TG S VR+W + F++G+ L + V D G + TG ++
Sbjct: 94 GHVYSLAAAGELLYTGTDSKNVRVWRHRREFAGFRSGSGLVKAIVVAGD-GRIYTGHQD 151
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 56 TEESEIDLFVASKIGSFKHIKYYTEAS 136
+E +E D F+A +G FKH+ YY S
Sbjct: 115 SEVTEDDFFLACVLGCFKHVHYYLMTS 141
>12_02_0800 + 23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -1
Query: 467 GHLRKPSIYQVSHQLEN-----QLASHPRCGPHHLNGR*QRAFRSDRARLHDLGR 318
G R YQ S EN QL+ PR HH GR R ++R R +D+G+
Sbjct: 1314 GEKRHVDDYQKSESHENAEQQQQLSHAPRRQGHHNGGRYHRGGGTNRGRGYDVGK 1368
>09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503
Length = 685
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 485 LWLAAPGHLRKPSIYQVSHQLENQLASHPRCGPHHLNG 372
LW A P +PS+ Q H L+++ A P P G
Sbjct: 610 LWCAHPDRSERPSMAQAMHALQSEEARLPALRPQMYKG 647
>04_01_0316 +
4251465-4251590,4251664-4251719,4252973-4253087,
4253174-4253417,4254189-4254325,4255006-4255065,
4255336-4255460,4256021-4256048,4256267-4256336,
4256513-4256565,4256966-4257025,4257498-4257544,
4257617-4257741,4258572-4258686,4258778-4258826,
4260415-4260471,4261126-4261209,4261363-4261442,
4262005-4262094,4262252-4262375
Length = 614
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/94 (25%), Positives = 41/94 (43%)
Frame = +2
Query: 80 FVASKIGSFKHIKYYTEASKNNKKCIENLIDIKTLEKDDEVTCMEWGNQEQTEILLARRN 259
FVA+++ + I YY K ++ I + D + ME G+ E+T+
Sbjct: 359 FVAAEVDNSHRIFYYRSRFKKSRTEI-----LPVARADAHI--MESGSPEETQAESEDDV 411
Query: 260 QQVQIYSTIDGFKATHSSDFAQGHVVGLGRSGTL 361
Q+ + ID K H S+ +Q + G+S L
Sbjct: 412 QEENENALIDDSKKLHGSNHSQSEFLAFGKSRKL 445
>04_01_0226 +
2842897-2842921,2843049-2843155,2843426-2843494,
2850676-2852745
Length = 756
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 113 IKYYTEASKNNKKCIENLIDIKTLEKDD 196
+K +TE SK NK C E L +++ L DD
Sbjct: 504 LKKHTEPSKKNKNCTELLEELEKLWGDD 531
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 191 DDEVTCMEWGNQEQTEILLARRNQQVQIYSTID---GFKATHSSDFAQGHVVGLGRSG-T 358
+DE+ +++ +++ + +A +QV++Y + + ++ + SG T
Sbjct: 366 NDEILDLKFVGEDEQYLAVATNLEQVRVYDVASMSCSYVLSGHTEIVVCIDTCISSSGKT 425
Query: 359 LFVTGHSSGVVRIWD 403
L VTG VR+WD
Sbjct: 426 LVVTGSKDSTVRLWD 440
>04_04_0815 -
28269918-28270022,28270164-28270226,28270342-28270460,
28270586-28270684,28270761-28270953,28271024-28271117,
28271339-28271394,28272372-28272431,28272877-28272989,
28273286-28273343,28273429-28273521,28273659-28273904,
28274990-28275371,28275523-28275595,28275692-28275795,
28275872-28275963,28275996-28276106,28276225-28276309,
28276385-28276518,28278264-28278302
Length = 772
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 347 RSGTLFVTGHSSGVVRIWD 403
++ L+VTGH G +R WD
Sbjct: 389 KTRNLYVTGHLDGTIRFWD 407
>04_03_0611 -
18011469-18012563,18012756-18012920,18013542-18013639,
18014541-18015498
Length = 771
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +2
Query: 182 LEKDDEVTCMEWGNQEQTEILLARRNQQVQIYSTIDGFKATHSSDFAQGHVVGLGRSGTL 361
L + DE + G Q E++ A N +Y G T +++F++ HV+G G GT+
Sbjct: 410 LRQTDEFF-QQHGGQILLEMMKADGNDGFTLYKR--GEIETATNNFSKAHVIGEGGQGTV 466
Query: 362 FVTGHSSGVVRIWDEKPVD 418
+ V I K +D
Sbjct: 467 YKAVIDGVAVAIKKCKEID 485
>04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,
1743724-1743776,1743914-1743991,1744107-1744405,
1744660-1745476,1745576-1745842,1745987-1746181,
1746287-1746372,1746469-1746657,1747138-1747207,
1747399-1747552,1747706-1747832,1749158-1749254
Length = 1128
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/65 (21%), Positives = 35/65 (53%)
Frame = +2
Query: 53 LTEESEIDLFVASKIGSFKHIKYYTEASKNNKKCIENLIDIKTLEKDDEVTCMEWGNQEQ 232
+ EE+ + LF ++ + ++ T + N C++ L + +E D+E E+ N+E+
Sbjct: 1041 MIEEAPVQLFSITQNQEMRDVED-TNRNTTNDYCVKRLEPVIGMEFDNEDIAYEFYNREE 1099
Query: 233 TEILL 247
++++
Sbjct: 1100 YDMVM 1104
>03_05_0233 -
22182565-22182897,22183025-22183193,22183287-22183537,
22183816-22183966,22184406-22184716
Length = 404
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 412 WLLIPDADHTT*MAGNKERSGATEPDYMTL--GEVRTVCGLETIYGR 278
WL IPD D T M +ER+ MT+ G + +CG+ + R
Sbjct: 217 WLNIPDYDAPTQMVKPRERNSRYVDAVMTVPKGTLFPMCGMNLAFDR 263
>02_05_0053 - 25442186-25443189,25444359-25444914
Length = 519
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 170 DIKTLEKDDEVTCMEWGNQEQ 232
D T + DD +CMEW +Q++
Sbjct: 312 DTSTCQADDRTSCMEWLDQQR 332
>11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475
Length = 634
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 287 DGFKATHSSDFAQGHVVGLGRSGTLF 364
D KAT DF + +++G GRSGT++
Sbjct: 316 DLMKAT--GDFTKDNIIGSGRSGTMY 339
>11_01_0673 - 5491694-5493102,5493386-5493995
Length = 672
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 286 YGRVYLYLLIPPCKKYFCLLLVTPLH 209
+ VY + +PP +Y LLLV LH
Sbjct: 5 FSSVYFNIFMPPLYRYLGLLLVISLH 30
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 170 DIKTLEKDDEVTCMEWGNQEQTEI 241
D + K +EVT M+WGN EI
Sbjct: 566 DASAISKGEEVTLMDWGNAIIKEI 589
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +1
Query: 283 HRWFQGHTQFGLRPRSCSRARSLRNALCYRPFKWCGPHLG 402
H W H + R RA + N C P W G +LG
Sbjct: 308 HVWDHDHPPYRCRHEDNIRAAPVLNPECGAPADWKGRYLG 347
>03_05_1069 + 30118930-30120120
Length = 396
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 320 AQGHVVGLGRSGTLFVTGHSSGVVRIWDEKP 412
+ G V + SG TGH G +R+W P
Sbjct: 61 SSGLVKAIVISGERIFTGHQDGKIRVWKVSP 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,495,789
Number of Sequences: 37544
Number of extensions: 288721
Number of successful extensions: 870
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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