Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M23
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical pr... 33 0.089
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 31 0.36
AF332210-1|AAK17981.1| 253|Caenorhabditis elegans nuclear recep... 31 0.36
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 31 0.36
AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear horm... 31 0.36
Z81489-11|CAJ30223.1| 323|Caenorhabditis elegans Hypothetical p... 30 1.1
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 30 1.1
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81105-3|CAB03217.1| 316|Caenorhabditis elegans Hypothetical pr... 28 3.3
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z83125-5|CAB05622.2| 362|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ... 28 4.4
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ... 28 4.4
Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical pr... 27 5.8
U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF016655-3|AAU05587.1| 322|Caenorhabditis elegans Serpentine re... 27 5.8
U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical p... 27 7.7
AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +2
Query: 158 ENLIDIKTLE-KDDEVTCMEWGNQEQTEILLARRNQQVQIYSTIDG-FKATHSSDFAQGH 331
+NL +IK+L+ K DE+T M W +++QTEIL+AR N+ +Q+ + + + G
Sbjct: 23 QNLNEIKSLDPKSDEITSMIWNDEQQTEILIARVNRDLQLLGIEENELVSILTVTGGTGP 82
Query: 332 VVGLGRSGTLFVTGHSSGVVRIWDEK 409
+ GL ++ VT SG ++IW++K
Sbjct: 83 IKGLHKADEKIVTCVESGELQIWNDK 108
>Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical
protein F02D10.6 protein.
Length = 199
Score = 33.5 bits (73), Expect = 0.089
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 289 IYGRVYLYLLIPPCKKYFCLLLVTPLHACDFIILF*CFDIYQILYTFLIVLACFCV-IFY 113
IY +LLI FC L ++ F +L C+++Y ILYT ++ F + +++
Sbjct: 46 IYNIWMFHLLIALFLSVFCKTLNFAIYRAGFRLLHMCYNVY-ILYTLGYMIVPFHISLYF 104
Query: 112 MFKRTY 95
+F+ TY
Sbjct: 105 LFEFTY 110
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 239 ILLARRNQQVQIYSTIDGFKATHSSDFAQGHVVGLGRSGTLFVTGHSSGVVRIWD 403
I+ ++ V+++ST+DG H+ V + +G++ VTG +R+WD
Sbjct: 309 IVSGSTDRTVKVWSTVDG-SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWD 362
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 239 ILLARRNQQVQIYSTIDGFKATHSSDFAQGHVVGLGRSGTLFVTGHSSGVVRIWD 403
I+ ++ V+++ST+DG H+ V + +G++ VTG +R+WD
Sbjct: 311 IVSGSTDRTVKVWSTVDG-SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWD 364
>AF332210-1|AAK17981.1| 253|Caenorhabditis elegans nuclear receptor
NHR-96 protein.
Length = 253
Score = 31.5 bits (68), Expect = 0.36
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = +2
Query: 50 LLTEESEIDLFVASKIGSFKHIKYYTEASKNNKKCIENLIDIKTLEKDD-----EVTCME 214
L E E+DL + + + +KYY +KCIE+LI++ + ++T
Sbjct: 111 LAIAEYEVDLSWCTNYTA-EQLKYYLSPDSEGQKCIEDLIELSPSSTEVNFMILQLTLHH 169
Query: 215 WGNQEQTEILLARRN----QQVQIYS-TIDGFK-ATHSSDFAQGHVVGLGRSGTLFVTGH 376
G + Q +L A N Q ++S ++ K +S+ A+ + G +G +
Sbjct: 170 AGKKSQGRLLEATENIIEAQANHLHSYYVEKVKMPNYSARLAKMMKINRGIAGEMRCRRE 229
Query: 377 SSGVVRIWDEKPVDF 421
+ + R++D V+F
Sbjct: 230 KNQIARVFDIMKVEF 244
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 239 ILLARRNQQVQIYSTIDGFKATHSSDFAQGHVVGLGRSGTLFVTGHSSGVVRIWD 403
I+ ++ V+++ST+DG H+ V + +G++ VTG +R+WD
Sbjct: 311 IVSGSTDRTVKVWSTVDG-SLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWD 364
>AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 96 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.36
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = +2
Query: 50 LLTEESEIDLFVASKIGSFKHIKYYTEASKNNKKCIENLIDIKTLEKDD-----EVTCME 214
L E E+DL + + + +KYY +KCIE+LI++ + ++T
Sbjct: 260 LAIAEYEVDLSWCTNYTA-EQLKYYLSPDSEGQKCIEDLIELSPSSTEVNFMILQLTLHH 318
Query: 215 WGNQEQTEILLARRN----QQVQIYS-TIDGFK-ATHSSDFAQGHVVGLGRSGTLFVTGH 376
G + Q +L A N Q ++S ++ K +S+ A+ + G +G +
Sbjct: 319 AGKKSQGRLLEATENIIEAQANHLHSYYVEKVKMPNYSARLAKMMKINRGIAGEMRCRRE 378
Query: 377 SSGVVRIWDEKPVDF 421
+ + R++D V+F
Sbjct: 379 KNQIARVFDIMKVEF 393
>Z81489-11|CAJ30223.1| 323|Caenorhabditis elegans Hypothetical
protein C55A1.14 protein.
Length = 323
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -3
Query: 315 SELCVALKPS-MVEYICTC*FLLARSISVCSW--LPHSMHVTSSSFSNVLISIRFSIHFL 145
+ CV +K + M+ I C I+ S+ LP ++ +T F + I I+ S H L
Sbjct: 58 NHFCVMIKMAYMIFVILICRVFPCFKINTLSFYLLPIALFLT---FYTLYIFIQ-SFHLL 113
Query: 144 LFLLAS---V*YFICLKEPILLATNKSISL 64
+FLLA V YF+ E +L+ K +S+
Sbjct: 114 MFLLAFLKFVLYFLPASEKVLVKVQKKVSI 143
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 83 VASKIGSFKHIKYYTEASKNNKKCIENLIDIKTLE 187
V + + +FKH+K + E K KK +E L IK +E
Sbjct: 557 VTTVVNNFKHLKAFVEKFKKFKKDLEFLNKIKKIE 591
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +2
Query: 251 RRNQQVQIYSTIDGFKATHSSDFAQGHVVGLGRSGT-----LFVTGHSSGVVRIW 400
R N QI++ + H++ + H+ G+ R + +VTG S G +++W
Sbjct: 2641 RDNDDYQIFTDTNSQNVKHTNVMIKRHIPGVRRIDSHPHAPFYVTGSSDGSIKVW 2695
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 335 VGLGRSGTLFVTGHSSGVVRIWD 403
V R G+L +G G+VRIWD
Sbjct: 219 VSFNRDGSLIASGSYDGLVRIWD 241
>Z81105-3|CAB03217.1| 316|Caenorhabditis elegans Hypothetical
protein R05D7.3 protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 137 KNNKKCIENLIDIKTLEKDDEVTCMEWGNQEQTEI 241
+ N L+D+ T +DD VT + GN E EI
Sbjct: 253 EQNDATTSGLVDLSTNPQDDAVTSEDLGNTETEEI 287
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 260 QQVQIYSTIDGFKATHSSDFAQG-HVVGLGRSGTLFVTGHSSGVVRIWD 403
Q+V+IY G + + + VVG +G TG GV RIW+
Sbjct: 102 QKVRIYDVSSGKDPKATIELPKNVTVVGFEAAGRWMYTGGDDGVCRIWE 150
>Z83125-5|CAB05622.2| 362|Caenorhabditis elegans Hypothetical
protein T15D6.6 protein.
Length = 362
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +2
Query: 59 EESEIDLFVASKIGSFKHIKYYTEASKNNKKCIENLIDIKTLEKDDEVTCME 214
+E+E D+ KI +KYY ++K+ N ++IK++E+ E+T ++
Sbjct: 144 KEAEKDVSKILKISHGSLLKYYIYQITHDKRNNMNTLNIKSVEEFLEITSVQ 195
>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
protein C02E11.1b protein.
Length = 1123
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 146 KKCIENLIDIKTLEKDDEVTCMEWGNQEQT-EILLARRNQQVQIYSTIDGFKATHSS 313
K +E + L+KD +V N++ +I +R + I +T+DGFK T +S
Sbjct: 721 KPAVEKAVVKAVLKKDKDVVIEAISNKDGAFKIGPVKRVEDYDITATLDGFKFTPTS 777
>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
protein C02E11.1a protein.
Length = 1121
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 146 KKCIENLIDIKTLEKDDEVTCMEWGNQEQT-EILLARRNQQVQIYSTIDGFKATHSS 313
K +E + L+KD +V N++ +I +R + I +T+DGFK T +S
Sbjct: 719 KPAVEKAVVKAVLKKDKDVVIEAISNKDGAFKIGPVKRVEDYDITATLDGFKFTPTS 775
>Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical
protein F20E11.1 protein.
Length = 331
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 315 SELCVALKPSMVEYICTC*FLLARSISVCSWLPHSMHVTSSSFS--NVLISIRFSIHFLL 142
+ C +K S + ++ C F ++SV S + + + F+ NVL I + H L+
Sbjct: 65 AHFCQMVKVSYLVFVSAC-FNFILAVSVNSLQTNRVLIALLFFALFNVLYIITQAFHVLI 123
Query: 141 FLLASV*YFI 112
F+LA +FI
Sbjct: 124 FVLAVERFFI 133
>U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical
protein F32A6.1 protein.
Length = 156
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 56 TEESEIDLFVASKIGSFKHIK-----YYTEASKNNKKCIENLIDIKTLEKDDEVTCMEWG 220
T+ E+ V K+ IK + E ++NK+ +EN+ +++T +D + E
Sbjct: 20 TKRDEVKYVVQQKMSQLATIKMEADQFMAELERDNKRLVENVKELETTVRDCDDRIPELK 79
Query: 221 NQEQTEILLARRNQ 262
N + ILL +N+
Sbjct: 80 N--ELAILLDDKNK 91
>AF016655-3|AAU05587.1| 322|Caenorhabditis elegans Serpentine
receptor, class z protein67 protein.
Length = 322
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2
Query: 169 YQILYTFLIVLACFCVIFYMFKRTYFTGYK*IYFTLLCQ*HVLYL*ENNIFK 14
Y +L L + CFCV Y F R + +TL+ + LYL N +F+
Sbjct: 64 YNMLKLTLPIWTCFCVSVYFFHRGHKNRIS--TYTLILTSYALYL-FNQVFR 112
>U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical
protein C45G9.11 protein.
Length = 354
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -2
Query: 250 CKKYFCLLLVTPLHACDFIILF*CFDIYQILYTFL 146
C FC L PL+ F ++ C D + +++ F+
Sbjct: 315 CLLIFCFLYQLPLNIWGFFVVKSCRDFFALIHVFV 349
>AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical
protein F19B2.8 protein.
Length = 330
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 216 HSMHVTSSSFSNVLISIRFSIHFLL 142
+S++ S+ NVLI I F IHFL+
Sbjct: 3 NSLYAPDSNTYNVLIGIGFVIHFLM 27
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,716,781
Number of Sequences: 27780
Number of extensions: 255989
Number of successful extensions: 886
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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