Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M19
         (625 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5DG14 Cluster: SJCHGC06729 protein; n=1; Schistosoma j...    35   1.4  
UniRef50_Q184M5 Cluster: Putative uncharacterized protein; n=3; ...    34   3.2  
UniRef50_Q4D0F3 Cluster: Putative uncharacterized protein; n=2; ...    34   3.2  
UniRef50_Q7WUF1 Cluster: Putative uncharacterized protein artA; ...    33   7.3  

>UniRef50_Q5DG14 Cluster: SJCHGC06729 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06729 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 402

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 268 CSVSNKHFGFPLTSYNYLEKNY*ANEVNYGISY 170
           C+   KHF FPL  YNY EK   +N  N   +Y
Sbjct: 84  CNSFEKHFNFPLRDYNYFEKFSNSNTTNNNNNY 116


>UniRef50_Q184M5 Cluster: Putative uncharacterized protein; n=3;
           Clostridium|Rep: Putative uncharacterized protein -
           Clostridium difficile (strain 630)
          Length = 469

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -2

Query: 513 KTMTKLKTHERIISCNDYKNDGIKSNS 433
           K +TK+KT++ I+  ND +NDG   NS
Sbjct: 438 KKLTKVKTNDEILEINDVRNDGYSMNS 464


>UniRef50_Q4D0F3 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 405

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = +2

Query: 98  LCLFYLNVICISFRQNKFLIYILFVGYAVVNFICLIILFKIIV*C*RETKMLITDRAKLL 277
           LCLF + +  +  RQ + +  +++VGY VV FI L  L        R+T++ + D +K L
Sbjct: 231 LCLFTI-LGFMWIRQRQMMFLLVYVGYLVVLFIALFALIIAAAVYDRDTQVSVMDPSKFL 289


>UniRef50_Q7WUF1 Cluster: Putative uncharacterized protein artA;
           n=1; Escherichia coli|Rep: Putative uncharacterized
           protein artA - Escherichia coli
          Length = 106

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 74  VISSSWKKLCLFYLNVICISFRQNKF-LIYI--LFVGYAVVNFICLIILFKI 220
           V+   W  +   ++ V+C+SF    F L+YI  L++G  V N    I  F I
Sbjct: 37  VLVKPWDSMTFIFMGVVCVSFAVILFWLVYIVCLYIGTLVKNIFIRIFAFSI 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,688,545
Number of Sequences: 1657284
Number of extensions: 8409487
Number of successful extensions: 14378
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14371
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)