Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M18
(387 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 126 7e-30
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 126 7e-30
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 29 1.1
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 29 1.1
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 4.6
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 27 4.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 27 4.6
Z69787-6|CAA93637.1| 341|Caenorhabditis elegans Hypothetical pr... 27 6.1
AL132858-11|CAH04763.1| 133|Caenorhabditis elegans Hypothetical... 27 6.1
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 26 8.1
Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical pr... 26 8.1
U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11 ... 26 8.1
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 26 8.1
AL161712-5|CAC70131.1| 244|Caenorhabditis elegans Hypothetical ... 26 8.1
AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility... 26 8.1
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 126 bits (303), Expect = 7e-30
Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 3/129 (2%)
Frame = +3
Query: 6 CEVYRQRCLCLDHSELCRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMR 185
C++YR+RCLC S+ C A V +EY G C+++ EC+E M+ FP RM DWLF +M+
Sbjct: 103 CDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMK 162
Query: 186 DLAERRELTPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDXFVSRHELFPIRA 356
+L +RREL H L E EAE++ ++ IWK+C+LD +D VS HEL PI A
Sbjct: 163 ELKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITA 220
Query: 357 PLMSLEHCI 383
P++ +E CI
Sbjct: 221 PVIPMESCI 229
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 126 bits (303), Expect = 7e-30
Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 3/129 (2%)
Frame = +3
Query: 6 CEVYRQRCLCLDHSELCRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMR 185
C++YR+RCLC S+ C A V +EY G C+++ EC+E M+ FP RM DWLF +M+
Sbjct: 103 CDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMK 162
Query: 186 DLAERRELTPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDXFVSRHELFPIRA 356
+L +RREL H L E EAE++ ++ IWK+C+LD +D VS HEL PI A
Sbjct: 163 ELKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITA 220
Query: 357 PLMSLEHCI 383
P++ +E CI
Sbjct: 221 PVIPMESCI 229
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 340 NSCRDTNXSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRRSARSRIMLNSQS 161
N R + + SR H + +RR R + SRS R SRR RSR S+S
Sbjct: 1511 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSR-ERYRSRRDRRSRTKSRSRS 1569
Query: 160 RMR 152
R R
Sbjct: 1570 RSR 1572
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 340 NSCRDTNXSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRRSARSRIMLNSQS 161
N R + + SR H + +RR R + SRS R SRR RSR S+S
Sbjct: 136 NRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRSRSR-ERYRSRRDRRSRTKSRSRS 194
Query: 160 RMR 152
R R
Sbjct: 195 RSR 197
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -1
Query: 168 ASRACAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVG 16
A+R A+ R R T S+ S+ G RGT + RGRGSA G
Sbjct: 54 AARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSARRGRGSARG 104
>Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical
protein F59B10.3 protein.
Length = 169
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 165 WLFNIMRDLAERRELTPHY 221
WLFN +D ++REL HY
Sbjct: 115 WLFNRSKDKQQKRELYEHY 133
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 120 TPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGT 13
TP P S+R + GG PR G GRG GT
Sbjct: 686 TPRSPQDGMSSRGSSGGQTPR--QGGGGGRGGHFGT 719
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 120 TPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGT 13
TP P S+R + GG PR G GRG GT
Sbjct: 686 TPRSPQDGMSSRGSSGGQTPR--QGGGGGRGGHFGT 719
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.1 bits (57), Expect = 4.6
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -1
Query: 177 C*TASRACAAGSLTFRSRCTPAFPCKS--RSTRSARGGTAPRGTAPSGRGRGSAVGT 13
C + +C GS + C+P+FP TR+AR G + T G +GT
Sbjct: 1864 CSNSICSCPQGSGVLNNVCSPSFPQNDNYNLTRTARPGDSCDNTIVCIGGSSCLIGT 1920
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 96 RSTRSARGGTAPRGTAPSGRGRG 28
R TRS RGG A G A G G G
Sbjct: 98 RDTRSRRGGYAEGGAAAGGGGGG 120
>Z69787-6|CAA93637.1| 341|Caenorhabditis elegans Hypothetical
protein C44C10.7 protein.
Length = 341
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 162 RACAAGSLTFRSRCTPAFPCK 100
R C AG++ F SR TP P K
Sbjct: 179 RDCHAGNILFASRLTPTAPVK 199
>AL132858-11|CAH04763.1| 133|Caenorhabditis elegans Hypothetical
protein Y113G7A.12 protein.
Length = 133
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 83 DRVLRDLQGNAGVQRERNVRLPAAHARLAVQHN 181
+ V+ DLQ + VQ+ RNVR ++ +R +V H+
Sbjct: 81 ESVMHDLQSS--VQQSRNVRASSSSSRESVMHD 111
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 84 SARGGTAPRGTAPSGRGRGSAVG 16
S R PR TAPS RG+ S G
Sbjct: 948 SGRATKKPRATAPSARGKTSGRG 970
>Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical
protein F40D4.12 protein.
Length = 733
Score = 26.2 bits (55), Expect = 8.1
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 225 RMEREAESN----LTRRWTNAAIWKWCDLDAH-DNDXFVSRHELFPIRAPLMSLE 374
R + +AE N LT+RWT + +W + A+ ND R L R+P+ +L+
Sbjct: 398 RFDADAEPNASPVLTKRWTRKELCEWFERRANFSNDL---RRNLVNQRSPIENLK 449
>U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11
protein.
Length = 137
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 14 VPTALPLPRPLGAVPRGAVPPRADRVLR 97
VP P P+P PRG P ++D+V +
Sbjct: 49 VPKVKPAPKPYSGAPRGR-PRKSDQVAK 75
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 84 SARGGTAPRGTAPSGRGRGSAVG 16
S R PR TAPS RG+ S G
Sbjct: 948 SGRATKKPRATAPSARGKTSGRG 970
>AL161712-5|CAC70131.1| 244|Caenorhabditis elegans Hypothetical
protein Y66D12A.8 protein.
Length = 244
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 90 YYGTCREMPECSENEMSDFPRRMRD 164
YY TC EM S+ ++ P+R RD
Sbjct: 44 YYCTCGEMAMISDTLINRMPKRERD 68
>AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility
group protein I alpha protein.
Length = 137
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 14 VPTALPLPRPLGAVPRGAVPPRADRVLR 97
VP P P+P PRG P ++D+V +
Sbjct: 49 VPKVKPAPKPYSGAPRGR-PRKSDQVAK 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.120 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,924,395
Number of Sequences: 27780
Number of extensions: 155966
Number of successful extensions: 604
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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