Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M15
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 93 4e-20
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 79 8e-16
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 61 1e-10
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 41 2e-04
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 38 0.001
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 36 0.007
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 34 0.016
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 32 0.066
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 28 1.1
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 1.9
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 27 2.5
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 25 7.6
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 25 10.0
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 25 10.0
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 92.7 bits (220), Expect = 4e-20
Identities = 49/126 (38%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Frame = +2
Query: 2 FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTK 181
FD+IV D K VLVEFYAPWCGHCK L P Y+KL E + T N++
Sbjct: 365 FDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDIS-VS 423
Query: 182 ITSFPTIKLYTKDNQVRD--YNGERTLAGLTKFVETDGEGAEPV----PTVSEYDEEEDV 343
I+ FPTI + +++V Y G+RTL L+ F++ EP+ +V D E+ V
Sbjct: 424 ISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHA-SFEPIKKEKESVPAPDLEDQV 482
Query: 344 PTRDEL 361
DE+
Sbjct: 483 AVEDEM 488
Score = 60.5 bits (140), Expect = 2e-10
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 26 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANEL-EHTKITSFPTI 202
+K ++V+FYAPWCGHCK L P Y+ + E +L I +PT+
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 203 KLYTKDNQVRDYNGERTLAGLTKFV 277
++ Q+ Y+G R L K++
Sbjct: 99 NVFKNGKQISQYSGPRKHDALVKYM 123
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 78.6 bits (185), Expect = 8e-16
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Frame = +2
Query: 2 FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHF--EXXXXXXXXXXXXTANELEH 175
FD++V D K VLVEFYA WCG+CK+L P Y+ LG+ F E A+
Sbjct: 150 FDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRL 209
Query: 176 TKITSFPTIKLYTKDNQVRD--YNGERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPT 349
++ SFPTIK + KD++ + Y G+R+L L +++ G + P + +PT
Sbjct: 210 HEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKK-SGTQRSPDGTLLSTAGRIPT 268
Query: 350 RDE 358
DE
Sbjct: 269 FDE 271
Score = 61.3 bits (142), Expect = 1e-10
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 23 TNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE--LEHTKITSFP 196
+ K L+EFYA WCGHCK L P+Y++LG FE + + IT FP
Sbjct: 38 SKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFP 97
Query: 197 TIKLYTKD-NQVRDYNGERTLAGLTKFV 277
T+ + D ++ Y+ R + LT+FV
Sbjct: 98 TLIWFPPDGSEPVQYSNARDVDSLTQFV 125
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 61.3 bits (142), Expect = 1e-10
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 38 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE--LEHTKITSFPTIKLY 211
LV FYAPWCG+CK+LVP Y KL + N ++ FPTIKL
Sbjct: 52 LVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLV 111
Query: 212 ---TKDNQV--RDYNGERTLAGLTKFV 277
+K + + DYNG+R+ L KFV
Sbjct: 112 YPSSKGSSLSSTDYNGDRSYKSLQKFV 138
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 26 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIK 205
+K +V+FYA WCG CK L P +KL E + ++ + + + PT+
Sbjct: 35 DKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKF-SDIAQKNGVYALPTMV 93
Query: 206 LYTKDNQV 229
L+ K ++
Sbjct: 94 LFRKGQEL 101
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 37.9 bits (84), Expect = 0.001
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Frame = +2
Query: 41 VEFYAPWCGHCKQLVPIYDKLGEHF--EXXXXXXXXXXXXTANELEH-TKITSFPTIKLY 211
+++Y P CG CK+L P++D + E + + EL I + PT+ LY
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLY 106
Query: 212 TKDNQVRD--YNGERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPTRDEL*ALGTVSA 385
V + + + A L FVET P T + +EDV T ++ + ++
Sbjct: 107 QNGEIVEEVPFGASTSEASLLDFVETH---LNP-DTDPDIPSDEDVLTDEDTEEVASIQP 162
Query: 386 TLS 394
LS
Sbjct: 163 ALS 165
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 35.5 bits (78), Expect = 0.007
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +2
Query: 26 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIK 205
+K V+V+F+A WCG CK + P +++ + + E + + P+
Sbjct: 18 DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAE-AGVHAMPSFF 76
Query: 206 LYTKDNQVRDYNG 244
LY ++ + G
Sbjct: 77 LYKNGEKIEEIVG 89
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 34.3 bits (75), Expect = 0.016
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 2 FDEIVFDTNKKV-LVEFYAPWCGHCKQLVPIYDKLGE 109
F EI+ + +++ L+ FYAPW CKQ+ ++D+ +
Sbjct: 11 FQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAK 47
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 32.3 bits (70), Expect = 0.066
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 41 VEFYAPWCGHCKQLVPIYDKLGEHF 115
V+ YA WCG CK + P++ +L +
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKY 48
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 230 RDYNGERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPTRDE 358
+D N E T ETD E V TV E +EE ++E
Sbjct: 223 KDENEENKETSTTNVAETDAPEEETVDTVEEIADEEKHSVKEE 265
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 212 TKDNQVRDYNGERTLAGLTKFVETDGEGAEPVPTVSEYDEEEDVPTRDE 358
T D + NG + + TK T EPV +Y E E +PT DE
Sbjct: 366 TGDQYLSLNNGTESQSKTTKH-STSLPSTEPVEVDKQYMESEKIPTIDE 413
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 609 YNTLFRLSLFILNVFSL 659
++ LFR+SL+IL VFSL
Sbjct: 73 FSKLFRISLYILGVFSL 89
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 191 FPTIKLYTKDNQVRDYNGERTLAGLTKFVE 280
FPT+ +Q+ +Y GE GL ++E
Sbjct: 526 FPTVYFTKISDQINNYEGELPTDGLKYYIE 555
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 570 YFSVIGNLMIDISYNTLFRLSLFILNVFSLN 662
YF IG +++ N L LSL +N SLN
Sbjct: 205 YFLNIGTIVVTFQLNVLRCLSLSQINGLSLN 235
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 273 NLVSPASVRSPL*SRTWLSL 214
+L SP S +P+ S TWLSL
Sbjct: 74 SLESPVSYSNPIPSLTWLSL 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,231,872
Number of Sequences: 5004
Number of extensions: 37996
Number of successful extensions: 109
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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