Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M11
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 43 2e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 43 2e-04
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 32 0.27
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.47
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 29 1.9
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 29 1.9
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 29 2.5
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 29 2.5
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 29 2.5
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 29 2.5
U23451-2|AAC46746.1| 107|Caenorhabditis elegans Insulin related... 28 4.4
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 28 5.8
AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical ... 28 5.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 7.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 7.7
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 102 IRRNSRCRPHARAQET*DRICGSDGKTYHNQCL*YCERDKTHSDLKIVKEGTCEEAES 275
+ R C+ + +CG+DGKTY N+C K D+ + K G C+EA S
Sbjct: 311 VDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGS 368
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CTREIKQVCGIDGIAYGNPC-LLNCATQSNPSLSI*HPGPCD 562
CT E K+VCG DG Y N C L N A + ++ + + C+
Sbjct: 468 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 33.9 bits (74), Expect = 0.088
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 108 RNSRCRPHARAQET*DRICGSDGKTYHNQCL*YCERDKTHSDLKIVKEGTC 260
R + C R ++ +C ++G+T+ N+C + +T S +K+ +GTC
Sbjct: 387 RTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 383 MIHRGECQEVKVADIQPCICTREIKQVCGIDGIAYGNPC-LLNCATQSNPSLSI*HPGPC 559
++ E E K D P E K+VCG DG+ Y + C + A + + G C
Sbjct: 525 VVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKC 584
Query: 560 D 562
D
Sbjct: 585 D 585
Score = 31.1 bits (67), Expect = 0.62
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 159 ICGSDGKTYHNQC 197
+CGSDGKTY N+C
Sbjct: 475 VCGSDGKTYSNEC 487
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CTREIKQVCGIDGIAYGNPCLLN-CATQSNPSLSI*HPGPCD 562
CT VCG DG Y N C L A + + + G CD
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 159 ICGSDGKTYHNQCL*YCERDKTHSDLKIVK--EGTCEE 266
+CG+DG TY ++C + ++ H ++ EG C+E
Sbjct: 551 VCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDE 586
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 461 VCGIDGIAYGNPCLLN 508
+CG DGI Y N C LN
Sbjct: 694 ICGSDGIVYNNQCHLN 709
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 159 ICGSDGKTYHNQC 197
ICGSDG Y+NQC
Sbjct: 694 ICGSDGIVYNNQC 706
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 102 IRRNSRCRPHARAQET*DRICGSDGKTYHNQCL*YCERDKTHSDLKIVKEGTCEEAES 275
+ R C+ + +CG+DGKTY N+C K D+ + K G C+EA S
Sbjct: 319 VDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGS 376
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CTREIKQVCGIDGIAYGNPC-LLNCATQSNPSLSI*HPGPCD 562
CT E K+VCG DG Y N C L N A + ++ + + C+
Sbjct: 476 CTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 33.9 bits (74), Expect = 0.088
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 108 RNSRCRPHARAQET*DRICGSDGKTYHNQCL*YCERDKTHSDLKIVKEGTC 260
R + C R ++ +C ++G+T+ N+C + +T S +K+ +GTC
Sbjct: 395 RTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 383 MIHRGECQEVKVADIQPCICTREIKQVCGIDGIAYGNPC-LLNCATQSNPSLSI*HPGPC 559
++ E E K D P E K+VCG DG+ Y + C + A + + G C
Sbjct: 533 VVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKC 592
Query: 560 D 562
D
Sbjct: 593 D 593
Score = 31.1 bits (67), Expect = 0.62
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 159 ICGSDGKTYHNQC 197
+CGSDGKTY N+C
Sbjct: 483 VCGSDGKTYSNEC 495
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 440 CTREIKQVCGIDGIAYGNPCLLN-CATQSNPSLSI*HPGPCD 562
CT VCG DG Y N C L A + + + G CD
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 159 ICGSDGKTYHNQCL*YCERDKTHSDLKIVKEGTCEE 266
+CGSDG TY N C K D+ V G C++
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQIDVVPVSMGICDD 854
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 159 ICGSDGKTYHNQCL*YCERDKTHSDLKIVK--EGTCEE 266
+CG+DG TY ++C + ++ H ++ EG C+E
Sbjct: 559 VCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDE 594
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 434 CICTREIKQVCGIDGIAYGNPCLLNCATQSNPSLSI*HPGPC 559
C C I+ VCG D + Y N C L C ++N L + G C
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTC 60
Score = 35.1 bits (77), Expect = 0.038
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 159 ICGSDGKTYHNQCL*YCERDKTHSDLKIVKEGT-CEEAESLRLYLHICP--GLWHIRE-H 326
+CG+D TY+N C C + +T+ DL GT C++ E ++ IC G HI + H
Sbjct: 28 VCGTDNVTYNNLCFLRCVQ-RTNEDLLFFYNGTCCDKKECEKVGTPICDNFGETHINDCH 86
Query: 327 LA 332
A
Sbjct: 87 FA 88
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 159 ICGSDGKTYHNQCL*YCERDKTHSDLKIVKEGTCEE 266
IC SD TY N C + ++ S+L+++ +G C E
Sbjct: 597 ICASDFSTYENLCQ-FRKQKCLDSELEVLFKGKCSE 631
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 434 CICTREIKQVCGIDG---IAYGNPCLLNCATQSNPSLSI*HPGPC 559
C C EI VC +G Y N C+ CA ++ L + + G C
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSC 69
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.47
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +2
Query: 332 PNKCSLEC--ARPFP---PSLEMIHRGECQEVKVADIQPCICTREIKQV-CGID 475
P+ C C AR F P E+ H G C E K+ + C C + K V CG D
Sbjct: 315 PHSCGETCGGARKFGCPHPCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSD 368
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 162 CGSDGKTYHNQCL*YCER--DKT--HSDLKIVKEGTCEEAESLRLYL 290
C ++G H+QC+ CER D T H+ + +G C E LYL
Sbjct: 386 CDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIEKCDAHLYL 432
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 162 CGSDGKTYHNQCL*YCER--DKT--HSDLKIVKEGTCEEAESLRLYL 290
C ++G H+QC+ CER D T H+ + +G C E LYL
Sbjct: 383 CDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIEKCDAHLYL 429
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 418 CRYTAMYLHAGDQTGLRYRRYRLRQPVPVELRHTVEPELEHL 543
CR Y H D+ ++R Y + VP V+PE++H+
Sbjct: 216 CRVLRKYAHRADEVLAKFREY--KSTVPTYGAILVDPEMDHV 255
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 418 CRYTAMYLHAGDQTGLRYRRYRLRQPVPVELRHTVEPELEHL 543
CR Y H D+ ++R Y + VP V+PE++H+
Sbjct: 239 CRVLRKYAHRADEVLAKFREY--KSTVPTYGAILVDPEMDHV 278
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 418 CRYTAMYLHAGDQTGLRYRRYRLRQPVPVELRHTVEPELEHL 543
CR Y H D+ ++R Y + VP V+PE++H+
Sbjct: 200 CRVLRKYAHRADEVLAKFREY--KSTVPTYGAILVDPEMDHV 239
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 418 CRYTAMYLHAGDQTGLRYRRYRLRQPVPVELRHTVEPELEHL 543
CR Y H D+ ++R Y + VP V+PE++H+
Sbjct: 216 CRVLRKYAHRADEVLAKFREY--KSTVPTYGAILVDPEMDHV 255
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 418 CRYTAMYLHAGDQTGLRYRRYRLRQPVPVELRHTVEPELEHL 543
CR Y H D+ ++R Y + VP V+PE++H+
Sbjct: 239 CRVLRKYAHRADEVLAKFREY--KSTVPTYGAILVDPEMDHV 278
>U23451-2|AAC46746.1| 107|Caenorhabditis elegans Insulin related
protein 3 protein.
Length = 107
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -2
Query: 583 FHNLHSVVARTRVLDAQARVRLCG 512
FHN+HS++AR+R D +V++CG
Sbjct: 43 FHNIHSLMARSRRGD---KVKICG 63
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 434 CICTRE-IKQVCGIDGIAYGNPCLLNCA 514
C+C + + VC + G AY +PC CA
Sbjct: 516 CMCEQTPLYPVCDVSGSAYYSPCHAGCA 543
>AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical
protein F43B10.1 protein.
Length = 311
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 359 RPFPPSLEMIHRGECQEVKVADIQPCICT 445
RPF L++ H G ++ +D+QP I T
Sbjct: 153 RPFMEKLDLSHLGPSDPLRDSDLQPAITT 181
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/47 (27%), Positives = 17/47 (36%)
Frame = -3
Query: 252 PLSRFSDRCASCPSRNTRGTGCGKSCRLIRRSGLKFLAHAHEDGSDC 112
PL + D CP G C + R+G F H +G C
Sbjct: 1375 PLHQLCDGKTHCPGGTDEGGRCARDLCSADRAGCSFKCHNSPNGPIC 1421
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/47 (27%), Positives = 17/47 (36%)
Frame = -3
Query: 252 PLSRFSDRCASCPSRNTRGTGCGKSCRLIRRSGLKFLAHAHEDGSDC 112
PL + D CP G C + R+G F H +G C
Sbjct: 1375 PLHQLCDGKTHCPGGTDEGGRCARDLCSADRAGCSFKCHNSPNGPIC 1421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,065,348
Number of Sequences: 27780
Number of extensions: 313812
Number of successful extensions: 1014
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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