Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M11
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.14 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.98 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.3  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +2

Query: 398 ECQEVKVADIQPCICTREI----KQVCGIDGIAYGNPCLLN-CATQSNPSLS 538
           EC+    + I  C+C R+     + VC  +G  Y N C L+  A  S  SL+
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAACHSGSSLT 143



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 159 ICGSDGKTYHNQCL*YCERDKTHSDLKIVK 248
           +C S+GK Y N C     R   HS   + K
Sbjct: 117 VCASNGKIYANHC--ELHRAACHSGSSLTK 144


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 76   YF*SPRAQIYAATVAAVLMRVRKKLKTGSADQTARLTTTSASSIARGTR 222
            Y+  P + +        LMR RK+ +  S D+T   +T +A++ A   R
Sbjct: 1068 YYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKTKETSTVTAAAAATNIR 1116


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 334 RAKCSRMCHRPGHI*RY 284
           R  C R+C+R G + R+
Sbjct: 244 RYNCERLCNRLGRVKRF 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,234
Number of Sequences: 438
Number of extensions: 4101
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)