Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M09
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.38 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.67 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    24   0.88 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.0  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.2  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 414 P*PQPGSSASTGACCPCLSAGLGPLRGNHGSRWLGKLT 301
           P P PGS  S G   PC ++G  PL       W G++T
Sbjct: 212 PYPPPGSLGSMGVSVPCGTSG-NPL------EWTGQVT 242


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 488 TIHLCLHNISKFFILT*S*FLTCLFHFYC 574
           T+HL L  +  ++ +    FL C+++FYC
Sbjct: 124 TVHL-LFLLCIYYFVVPLFFLLCIYYFYC 151



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 545 FLTCLFHFYC 574
           FL C++HF+C
Sbjct: 162 FLLCIYHFFC 171



 Score = 23.0 bits (47), Expect = 2.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 545 FLTCLFHFYC 574
           FL C+++FYC
Sbjct: 281 FLLCIYYFYC 290


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 360 IDKDNKPQWKPKTLAEVTDDYVESYFKKLPDDKE 461
           + K+NK  W+PK   +  DD + S       D+E
Sbjct: 142 LKKENKMTWEPKNKTDDDDDALVSDSDDREKDEE 175


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 99  NIKHINYCFAASTVEEIIERLEKVNNEWSIK 191
           N K I    +A  V+++++  EKV N W +K
Sbjct: 241 NEKEIFERLSALPVDKLLQISEKVANIWGLK 271


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 67  DEPPEESLWRP 99
           +EP EE  WRP
Sbjct: 238 EEPTEEKPWRP 248


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 391 GFHWGLLSLSISRARTPSGK 332
           GF WG L  ++  +RTP  K
Sbjct: 200 GF-WGQLGAAVDESRTPRPK 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,132
Number of Sequences: 336
Number of extensions: 2469
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)