Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M09
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107...   112   2e-25
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468...   103   1e-22
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935...    72   5e-20
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821...    85   6e-17
06_03_0634 + 22963211-22963270,22963532-22963628,22964604-229647...    46   2e-05
12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-25...    30   1.3  
11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-23...    30   1.3  
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742...    29   2.9  
02_05_0627 + 30463452-30463774,30463841-30463956,30464125-304643...    29   3.9  
01_01_0317 - 2569072-2569305,2569418-2569633,2569738-2570016,257...    28   5.1  
05_05_0226 + 23442971-23443857,23444209-23446324                       28   6.8  
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424...    28   6.8  

>10_08_1007 -
           22210263-22210400,22210506-22210547,22210626-22210727,
           22212239-22212337,22212413-22212473,22213311-22213432,
           22217700-22217786,22217958-22218041,22218141-22218220,
           22218404-22218467,22218904-22218972,22219099-22219179,
           22219626-22219694,22220108-22220140
          Length = 376

 Score =  112 bits (270), Expect = 2e-25
 Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
 Frame = +3

Query: 111 INYCFAASTVEEIIERLEK----VNNEWSIKTLESLHQMCPGSLKITLRALQRGAQLDLG 278
           IN CF+  TVEEII  LE+    V +EW    ++SL +  P SLKI+LR+++ G    +G
Sbjct: 234 INKCFSKRTVEEIIASLEQEAPNVADEWVASAIQSLRKASPTSLKISLRSIREGRTQTVG 293

Query: 279 QCLKMEYRLAC---RATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTDDYVESYFKKLP 449
           +CL+ EYR+ C   R   + DF EG RA+L+DKD  P+W P  L EV D+ VE YF K+ 
Sbjct: 294 ECLRREYRMVCHVMRGDFSRDFFEGCRAILLDKDRNPKWMPPRLEEVHDEVVEKYFSKV- 352

Query: 450 DDKELQFLE 476
           DD E + L+
Sbjct: 353 DDPEWEDLD 361


>01_06_0729 -
           31546464-31546574,31546653-31546694,31546795-31546896,
           31547148-31547246,31547522-31547582,31547659-31547807,
           31547963-31548048,31548249-31548333,31548642-31548725,
           31548820-31548893,31549035-31549095,31549546-31549614,
           31549712-31549795,31549893-31549937
          Length = 383

 Score =  103 bits (246), Expect = 1e-22
 Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
 Frame = +3

Query: 111 INYCFAASTVEEIIERLEKVN----NEWSIKTLESLHQMCPGSLKITLRALQRGAQLDLG 278
           IN CF+A T+E+II+  E       N+W    L+ + +  P SLK+TLR+++ G +  L 
Sbjct: 250 INKCFSAETIEDIIKAFESEGSIDGNQWIATVLKGMRRSSPTSLKMTLRSIREGRKQSLP 309

Query: 279 QCLKMEYRLAC---RATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTDDYVESYFKKLP 449
           +CLK E+RL     R+    D  EG+RAL IDKDN P+W P TL EV ++ ++  F+   
Sbjct: 310 ECLKKEFRLTMNTLRSVVTGDVYEGIRALSIDKDNAPKWSPATLEEVKNEDIDRLFEPFS 369

Query: 450 DDKELQ 467
            +KELQ
Sbjct: 370 SEKELQ 375


>12_01_0945 +
           9351915-9351929,9352221-9352386,9352903-9353024,
           9353098-9353214,9356997-9357077,9357204-9357272,
           9357727-9357790,9357988-9358067,9358164-9358247,
           9358418-9358502,9359658-9359743,9359924-9360045,
           9360841-9360901,9360981-9361166,9363622-9363723,
           9363803-9363844,9363949-9364086
          Length = 539

 Score = 71.7 bits (168), Expect(2) = 5e-20
 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
 Frame = +3

Query: 246 ALQRGAQLDLGQCLKMEYRLAC---RATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTD 416
           +++ G    +G+CL+ EYR+ C   R   + DF EG RA+L+D+D  P+W P  L EV D
Sbjct: 446 SIREGRTQTVGECLRREYRMVCHVMRGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHD 505

Query: 417 DYVESYFKKLPDDKELQFLE 476
           + VE YF K+ DD E + L+
Sbjct: 506 EVVEKYFSKV-DDPEWEDLD 524



 Score = 43.6 bits (98), Expect(2) = 5e-20
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
 Frame = +3

Query: 111 INYCFAASTVEEIIERLEK----VNNEWSIKTLESLHQMCPGSLKITLRAL 251
           IN CF+  TVEEII  LE+    V +EW    ++S+ +  P S+KI+LR++
Sbjct: 368 INKCFSKKTVEEIIASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRSV 418


>10_08_0871 -
           21181798-21181917,21182024-21182065,21182162-21182191,
           21182227-21182328,21182414-21182512,21182824-21182884,
           21183447-21183568,21183673-21183758,21183880-21183964,
           21184125-21184208,21184292-21184371,21184722-21184785,
           21184859-21184927,21185263-21185343,21185438-21185578
          Length = 421

 Score = 84.6 bits (200), Expect = 6e-17
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 17/137 (12%)
 Frame = +3

Query: 87  SLAPNIKHINYCFAASTVEEIIERLE----KVNNEWSIKTLESLHQMCPGSLKITLRALQ 254
           S+   ++ I+ CF+  TVEEI++ +E    ++N +WS   L+ L +  P +LK++LR+++
Sbjct: 267 SIVHRLEVIDKCFSLETVEEIVDAMEIEAARLNEDWSTLALKRLKEASPLALKVSLRSIR 326

Query: 255 RGAQLDLGQCLKMEYRLACRATE---NHDFPE----------GVRALLIDKDNKPQWKPK 395
            G    L +CL  EYR++        +H+F E          GVRA L++KD  P+W P 
Sbjct: 327 EGRYQTLDECLVREYRMSINGISEKFSHEFREVYRILFIDDQGVRARLVEKDLAPKWDPP 386

Query: 396 TLAEVTDDYVESYFKKL 446
            L  V+ D V+SYF  L
Sbjct: 387 ALEYVSADMVDSYFAPL 403


>06_03_0634 +
           22963211-22963270,22963532-22963628,22964604-22964733,
           22965132-22965310,22965456-22965583,22965698-22965769,
           22966984-22967082
          Length = 254

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
 Frame = +3

Query: 135 TVEEIIERLEKVNN-------EWSIKTLESLHQMCPGSLKITLRALQRGAQL-------- 269
           +V E +E L+K +        EW+ + L  L +  P SL +T +   + A          
Sbjct: 137 SVAESVEELKKCSQSDDAAVAEWANEALAGLKKGAPFSLCLTQKHFSQVASAYRNNEHYL 196

Query: 270 -DLGQCLKMEYRLACRATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTDDYVESYFKKL 446
             L   +K+EYR+A R++  +DF EG           P+WKP TL +V    VES F+ L
Sbjct: 197 SKLAGVMKVEYRIALRSSVRNDFVEG----------NPKWKPATLEDVDKGEVESVFEPL 246

Query: 447 PDDKEL 464
             + EL
Sbjct: 247 AAEAEL 252


>12_01_0029 +
           248725-248769,248870-249074,250040-250128,250237-250315,
           250429-250556,250764-250862,250953-251061,251301-251380,
           251464-251691,251768-251833,251970-252086,252538-252735,
           252847-252963,253056-253115,253228-253314,253419-253502,
           253623-253757,253837-253899,253979-254083,254174-254286,
           254374-254626,254715-254851,254970-255248,255352-256354,
           256450-256935,257023-257193,257285-257470,257820-257942,
           258024-258134,258225-258395
          Length = 1708

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +3

Query: 54  AGQIRRASGRVSLAPNIKHINYCFAASTVEEIIERLEKVNNEWSIKTLESLHQM-CPGSL 230
           AG   RA    +  P+IK +     A   + ++E    ++ EW+++ ++ L  +   G+L
Sbjct: 634 AGLYLRALQHYTELPDIKRVMVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRGNL 693

Query: 231 KITLRALQR-GAQLDLGQCLKM 293
           +I ++A +    QL +  C+K+
Sbjct: 694 QIVVQAAKEYSEQLGVDACIKL 715


>11_01_0030 +
           233285-233329,233439-233643,234637-234725,234834-234912,
           235048-235175,235383-235481,235572-235680,235920-235999,
           236083-236310,236387-236452,236589-236705,237142-237339,
           237451-237567,237660-237719,237832-237918,238023-238106,
           238233-238367,238446-238508,238588-238692,238781-238893,
           238981-239233,239322-239458,239577-239855,239958-240960,
           241054-241539,241627-241797,241890-242075,242426-242548,
           242630-242740,242834-243004
          Length = 1708

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +3

Query: 54  AGQIRRASGRVSLAPNIKHINYCFAASTVEEIIERLEKVNNEWSIKTLESLHQM-CPGSL 230
           AG   RA    +  P+IK +     A   + ++E    ++ EW+++ ++ L  +   G+L
Sbjct: 634 AGLYLRALQHYTELPDIKRVMVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRGNL 693

Query: 231 KITLRALQR-GAQLDLGQCLKM 293
           +I ++A +    QL +  C+K+
Sbjct: 694 QIVVQAAKEYSEQLGVDACIKL 715


>03_02_0319 -
           7421357-7421757,7421768-7421843,7424695-7424796,
           7424911-7424982
          Length = 216

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +2

Query: 389 AEDPXXXXXXXXXXXXQETSRRQGTTILRSQTLTIHLCLHNISKFFILT 535
           A+DP             +   R G T  + + LTI +CLH  +K F +T
Sbjct: 31  ADDPDADPVFKNDALDMDVLYRSGETHQKYKELTIEICLHRWAKDFHIT 79


>02_05_0627 +
           30463452-30463774,30463841-30463956,30464125-30464371,
           30464458-30464555,30465216-30465284,30465752-30465820,
           30465913-30466028
          Length = 345

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +3

Query: 315 ATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTDDYVESYFKKLPDDKELQ 467
           A  NH    G     + +  KP  +  T A++ D Y ++  K L ++K+ Q
Sbjct: 184 AVSNHSSSSGENEFWLVRMEKPGVEVVTKAQMVDHYTQTLMKVLGNEKDAQ 234


>01_01_0317 -
           2569072-2569305,2569418-2569633,2569738-2570016,
           2570491-2570997
          Length = 411

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 273 LGQCLKMEYRLACRATENHDFPEGVRALLI----DKDNKPQWKPKTLAEV 410
           +G+  +  + LAC+     D P G  A+LI    ++   P W P  + +V
Sbjct: 280 MGELDERPFHLACKRKHREDDPRGKAAMLISYWQEELKNPSWHPFKIIQV 329


>05_05_0226 + 23442971-23443857,23444209-23446324
          Length = 1000

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 42  GGLAAGQIRRASGRVSLAPNIKHINYCFA-ASTVEEIIERLEKVNNE 179
           GG   GQ+  A+G  S AP+ +        A  VEE++  L++V+ E
Sbjct: 160 GGGGGGQLTGAAGTSSTAPSCRASRIPVGIAEPVEELLSMLDEVDGE 206


>04_04_1121 -
           31041629-31041793,31041891-31042022,31042255-31042425,
           31042521-31042622,31042703-31042807,31043115-31043286,
           31043916-31043980,31044179-31044502,31044729-31044846,
           31044928-31045011,31045472-31045603,31045714-31046570,
           31046735-31046849,31047371-31047481,31047763-31047824
          Length = 904

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 65  STSLRKSLSGAQHQAHQLLLRRFHGRRD 148
           +TS+ K L G     H L+L+  HGR+D
Sbjct: 741 ATSVCKDLQGTVLDGHALILQLCHGRKD 768


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,916,781
Number of Sequences: 37544
Number of extensions: 317301
Number of successful extensions: 1161
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)