Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M09
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical pr...   118   4e-27
U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical pr...   118   4e-27
U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical p...    32   0.28 
AF039050-4|AAC47937.1|  499|Caenorhabditis elegans Cytochrome p4...    25   3.2  
AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : short...    29   3.5  
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    28   6.1  

>U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical
           protein F09F7.4b protein.
          Length = 363

 Score =  118 bits (283), Expect = 4e-27
 Identities = 55/127 (43%), Positives = 81/127 (63%)
 Frame = +3

Query: 87  SLAPNIKHINYCFAASTVEEIIERLEKVNNEWSIKTLESLHQMCPGSLKITLRALQRGAQ 266
           SL+ N+  I   F A +VEEI+  LEK  ++W+ K   +L +M P SLK+T R +  G++
Sbjct: 236 SLSKNLAQIRDSFKAKSVEEILASLEKDGSDWAKKQAATLGKMSPTSLKVTHRQITEGSK 295

Query: 267 LDLGQCLKMEYRLACRATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTDDYVESYFKKL 446
           +   +   MEYRL  R   + DF EG RA+L+DKD KP+W P TLA+V D  V++YF  L
Sbjct: 296 MSYAKIFTMEYRLTQRFLADKDFHEGCRAILVDKDRKPKWNPATLADVKDSVVDNYFSPL 355

Query: 447 PDDKELQ 467
           P++ +L+
Sbjct: 356 PNNSDLK 362


>U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical
           protein F09F7.4a protein.
          Length = 386

 Score =  118 bits (283), Expect = 4e-27
 Identities = 55/127 (43%), Positives = 81/127 (63%)
 Frame = +3

Query: 87  SLAPNIKHINYCFAASTVEEIIERLEKVNNEWSIKTLESLHQMCPGSLKITLRALQRGAQ 266
           SL+ N+  I   F A +VEEI+  LEK  ++W+ K   +L +M P SLK+T R +  G++
Sbjct: 259 SLSKNLAQIRDSFKAKSVEEILASLEKDGSDWAKKQAATLGKMSPTSLKVTHRQITEGSK 318

Query: 267 LDLGQCLKMEYRLACRATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTDDYVESYFKKL 446
           +   +   MEYRL  R   + DF EG RA+L+DKD KP+W P TLA+V D  V++YF  L
Sbjct: 319 MSYAKIFTMEYRLTQRFLADKDFHEGCRAILVDKDRKPKWNPATLADVKDSVVDNYFSPL 378

Query: 447 PDDKELQ 467
           P++ +L+
Sbjct: 379 PNNSDLK 385


>U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical
           protein K12D9.12 protein.
          Length = 831

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 216 CPGSLKITLRALQRGAQLDLGQCLKMEYRLACRATENH 329
           C   +++ L  +Q GAQ  LG C+ + + LAC  T+N+
Sbjct: 789 CGKRVELQLEDIQSGAQHHLGACVVLIWTLACYFTKNY 826


>AF039050-4|AAC47937.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 34A7 protein.
          Length = 499

 Score = 24.6 bits (51), Expect(2) = 3.2
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 396 TLAEVTDDYVESYFKKLPDDKE 461
           TL+E  DD+V+++  K+  DK+
Sbjct: 265 TLSEEGDDFVDAFIVKMEKDKK 286



 Score = 22.6 bits (46), Expect(2) = 3.2
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +3

Query: 201 SLHQMCPGSLKITLRALQRGAQLDLGQCLKMEYRLACRATENHDFPEGVRALLIDKDNKP 380
           SL  +  GS+   L   +R  Q D  +  +++  LA  A EN    EGV  L + K    
Sbjct: 173 SLFDLLVGSIINQLLVSERFEQDD-EEFEELKTNLAM-ALENGSIIEGVLPLWMLKSRFM 230

Query: 381 QWKPKT 398
           +W+ KT
Sbjct: 231 KWRTKT 236


>AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 9 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 435 SRTLRNRP*PQPGSSASTGACCPCLSAGLGPLRGNHG 325
           +RT R  P    G+S S G+CC C     GP RG  G
Sbjct: 69  NRTKRQSPYGNYGASGS-GSCCACTQGSPGP-RGQPG 103


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
 Frame = +3

Query: 81  RVSLAPNIKHINYCFAASTVEEIIERLEKVNNEWSIKTLESLHQMC-PGSLKITLRALQR 257
           +V LA  I +    F    +E  ++ +   +++ + +T+++L      G L+IT   +Q 
Sbjct: 66  KVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTSNVQ- 124

Query: 258 GAQLDLGQCLKMEYRLACR---ATENHDFPEGVRALLIDKDNKPQWKPKTLAEVTDDYVE 428
              L       +E    C     T  H  P    AL I +  K     + + E+TDDY++
Sbjct: 125 SIMLGANFFQMLEVVQHCGNFLLTRLH--PSN--ALSIREFCKMMCVEEKITEMTDDYIQ 180

Query: 429 SYFKKLPDDKELQFL 473
            +F  +  D++ + L
Sbjct: 181 KHFMAVSKDEDFKRL 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,963,487
Number of Sequences: 27780
Number of extensions: 247042
Number of successful extensions: 808
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)