Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M08
         (472 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p...    28   2.9  
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p...    28   2.9  
AF106576-2|AAC78180.1|  241|Caenorhabditis elegans Hypothetical ...    28   3.9  
Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical pr...    27   9.0  
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    27   9.0  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
           protein C47E12.5b protein.
          Length = 1028

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 147 FFKELEGVGQRVRDAIISAGPAIDVLQKAKD-IADGRDSNEE 269
           F  +  G  + V D +IS G  ID+LQK KD + D R S+ E
Sbjct: 630 FLSDERGFNEHV-DKLIS-GQQIDILQKVKDALIDARPSSAE 669


>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
           protein C47E12.5a protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 147 FFKELEGVGQRVRDAIISAGPAIDVLQKAKD-IADGRDSNEE 269
           F  +  G  + V D +IS G  ID+LQK KD + D R S+ E
Sbjct: 715 FLSDERGFNEHV-DKLIS-GQQIDILQKVKDALIDARPSSAE 754


>AF106576-2|AAC78180.1|  241|Caenorhabditis elegans Hypothetical
           protein W07E6.5 protein.
          Length = 241

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 361 YRNNKYFFKFLNDIVYN*FLWAPNIIK-YVYHSSLESRPSAMSLAF 227
           Y N++ +   +  IV   FLWAP+ +  YV+ S++ S   A SL F
Sbjct: 158 YSNSELWVLLILWIVCALFLWAPSFLGIYVHVSTIVSPQLAFSLQF 203


>Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.6 protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +2

Query: 269 MIYIFYNIRCPKELIVNNIIQEFKEIFIISIIQKVG*PVISINCLLLVYINLILIKSM 442
           MIY+ Y+I C K++I    +  F   F I +   +   +     LL+   N   +K++
Sbjct: 23  MIYLLYSIFCSKKIIFKPSLSIFYCRFFIDVFLTLSVSINKTYFLLISISNEYAVKNL 80


>Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical
           protein F46G10.5 protein.
          Length = 765

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +3

Query: 81  SVRILIFVAICVMFVSTV 134
           SV +L F+A+C+++ ST+
Sbjct: 620 SVAVLNFIAVCILYASTI 637


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +2

Query: 275 YIFYNIRCPKELIVNNIIQEFK-EIFIISIIQKVG*PVISINCLLLVYINLILIKSMKVN 451
           Y  YN  C   + VNN+   +    + I +   +G  ++ I CL+L Y+ ++     K  
Sbjct: 359 YGVYNGACAAAVNVNNVGVAYAFRTWTIVLGCLLGIALLLILCLILAYLIILNRSYPKEQ 418

Query: 452 HGHEYVI 472
           +  EYV+
Sbjct: 419 YEEEYVV 425


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +2

Query: 275 YIFYNIRCPKELIVNNIIQEFK-EIFIISIIQKVG*PVISINCLLLVYINLILIKSMKVN 451
           Y  YN  C   + VNN+   +    + I +   +G  ++ I CL+L Y+ ++     K  
Sbjct: 323 YGVYNGACAAAVNVNNVGVAYAFRTWTIVLGCLLGIALLLILCLILAYLIILNRSYPKEQ 382

Query: 452 HGHEYVI 472
           +  EYV+
Sbjct: 383 YEEEYVV 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,245,952
Number of Sequences: 27780
Number of extensions: 170413
Number of successful extensions: 418
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)