Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_M06
(680 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 178 7e-46
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 171 6e-44
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 142 4e-35
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 132 3e-32
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 121 8e-29
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 45 9e-06
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 44 2e-05
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 27 2.5
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 2.5
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 25 7.7
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 178 bits (433), Expect = 7e-46
Identities = 89/211 (42%), Positives = 122/211 (57%)
Frame = +1
Query: 40 KVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRY 219
K I+ LFINN+ VD+V +P E +I +VA+ F
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 220 SEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAG 399
+ WR ++QRG L +LA +E++ +YLA +ETLDNGK + A +V A+ RYY G
Sbjct: 77 APWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGG 136
Query: 400 KADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPA 579
ADK G TI D + +T EP+GVCGQI+PWN+P M WKIAPA+A G T+++K A
Sbjct: 137 WADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTA 196
Query: 580 EQTPLTALAMAALVKEAGVPAGVVHVIPGYG 672
E TPL+AL + V E G P GV++V+ G G
Sbjct: 197 ELTPLSALCLTKFVPECGFPPGVINVLSGDG 227
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 171 bits (417), Expect = 6e-44
Identities = 99/225 (44%), Positives = 129/225 (57%), Gaps = 3/225 (1%)
Frame = +1
Query: 7 LFTRVNFI--KMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXX 180
LF +NF K VK I L+IN EW S +T+ T++P E VI +V
Sbjct: 5 LFVSINFPNGKSVKQPIG---LYINGEWHK--SAETWETVDPSIEEVIAKVYLAGEKEID 59
Query: 181 XXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKP-VKQAEQ 357
F W+ + S++G LL KLA L E+ A LA +E +D+GKP V A
Sbjct: 60 YAVKSAKEAF---KTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARG 116
Query: 358 EVLWASGIVRYYAGKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIA 537
+V ++RY AG ADKI G IP E L + + P+GVCGQI+PWNYP+ M WKIA
Sbjct: 117 DVDGTIALLRYCAGWADKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIA 176
Query: 538 PALAAGCTVVVKPAEQTPLTALAMAALVKEAGVPAGVVHVIPGYG 672
PALAAG +++K AE TPL+ L A LV+EAG P GVV++I G G
Sbjct: 177 PALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIISGLG 221
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 142 bits (344), Expect = 4e-35
Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 1/227 (0%)
Frame = +1
Query: 1 ARLFTRVNFIKMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXX 180
++L T + + + ++ + +I +WV A S KTF NP + V +
Sbjct: 5 SKLSTNIKDLSLFDLEEFPARSYIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETR 64
Query: 181 XXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQE 360
F Y R D +R +L + L+ +A LA + TL+NGK + A+ E
Sbjct: 65 KAIKVAHEAFLSY---RNSDIKERYAILRRWYDLIMENADDLATMMTLENGKALGDAKGE 121
Query: 361 VLWASGIVRYYAGKADKILGNT-IPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIA 537
V++A+ + ++AG+A +I G++ + ++ + T+K+PVGV G I PWN+P M K+
Sbjct: 122 VVYAAKFIDWFAGEALRISGDSSMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVG 181
Query: 538 PALAAGCTVVVKPAEQTPLTALAMAALVKEAGVPAGVVHVIPGYGPT 678
ALAAGCTVV++PA +TP TALA+A L + AGVPAGV++++ P+
Sbjct: 182 AALAAGCTVVIRPAAETPFTALALAKLAERAGVPAGVLNMVTANSPS 228
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 132 bits (320), Expect = 3e-32
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 2/207 (0%)
Frame = +1
Query: 46 DIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSE 225
D + + F+ +W+ + + KTF NP +I +VA+ F Y
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTYKN 73
Query: 226 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKA 405
+ + SQ LL + A L+ + L ++ TL+NGKP+ QAE EV SG +++YA +A
Sbjct: 74 FTHVQRSQ---LLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEA 130
Query: 406 DKILGNTIPADGEVLTF--TLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPA 579
+ G+ P+ + F ++K+PVGV I PWN+P M K ALAAGCT + PA
Sbjct: 131 VRTFGDVAPSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPA 190
Query: 580 EQTPLTALAMAALVKEAGVPAGVVHVI 660
+TP L + L +EAG P GV++VI
Sbjct: 191 FRTPYVCLGLVRLAQEAGFPDGVLNVI 217
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 121 bits (292), Expect = 8e-29
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 5/208 (2%)
Frame = +1
Query: 64 LFINNEWVDAV--SKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLL 237
LFI+ ++V + + K P INP E +I A F R W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Query: 238 DASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADK-- 411
QRGL+L K+A +M + LA ++T++ GKP A ++ + + YYA A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDN 141
Query: 412 -ILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTVVVKPAEQT 588
+ +P + F + P GV G I PWN+P+ M +WK+ PA+A+G VV+KP+E
Sbjct: 142 PTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELA 201
Query: 589 PLTALAMAALVKEAGVPAGVVHVIPGYG 672
P + L A + KEAG+P GV++VI G G
Sbjct: 202 PWSCLEFALICKEAGLPDGVLNVIIGSG 229
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 45.2 bits (102), Expect = 9e-06
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Frame = +1
Query: 226 WRLLDASQRGLLLFKLATLMERDAKY-LAELETLDNGKPVKQAEQEV-LWASGIVRYYAG 399
W L + R + K A L+ +Y L + GK + QAE + + +R+
Sbjct: 97 WESLPFADRSAIFLKAAHLISTKYRYKLMAATMIGQGKNIWQAEIDAGMEIIDFLRFNTK 156
Query: 400 KADKILGNTIPADGEVLTFTLK-EPV-GVCGQILPWNYPIPMFIWKIAPALAAGCTVVVK 573
A ++ + P + + ++ P+ G I P+N+ AP L G V++K
Sbjct: 157 YASELYASQPPENTPGVWNRMEYRPLEGFVYAITPFNFTAIAGNLAAAPLLM-GNVVLMK 215
Query: 574 PAEQTPLTALAMAALVKEAGVPAGVVHVIPG 666
P++ L++ + + +EAG+PAG + IPG
Sbjct: 216 PSDHAVLSSYIVYQIFREAGLPAGALQFIPG 246
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 44.4 bits (100), Expect = 2e-05
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Frame = +1
Query: 223 EWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKP-VKQAEQEVLWASGIVRYYAG 399
EW+ ++R L L + R+ AE+ D GK V A E+L + +
Sbjct: 40 EWKSTSFAERRNFLKALKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLA 99
Query: 400 KADKILGNTIPADGEVLT-----FTLKEPVGVCGQILPWNYPIPMFIWKIAPALAAGCTV 564
++ L T +LT + EP+GV ++ WNYP+ + I AL AG +
Sbjct: 100 NGEQSLRPT-KRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAI 158
Query: 565 VVKPAEQT 588
VVK +E T
Sbjct: 159 VVKGSELT 166
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 2.5
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 256 LLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGNTIPA 435
L+ KL + KY ++ D G P+ + + E L SG+ + +K+L +
Sbjct: 531 LIKEKLTVNVPVKPKYSSQETAFDTGAPISEEQIEELLNSGLDEQ---EGEKLLVLHVSE 587
Query: 436 DGEVLTFT--LKEPVGV 480
V TFT LK P G+
Sbjct: 588 KDPVGTFTEVLKNPFGL 604
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -1
Query: 665 PGITWTTPAGTPASLTSAAIASA----VSGVCSAGLTTTVQP 552
PG + TPA T A+ T A IA+ V V G TT V P
Sbjct: 212 PGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPP 253
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 340 VKQAEQEVLWASGIVRYYAGKADKILG 420
VK+ + +W G + YAG+ +ILG
Sbjct: 219 VKKGDTVAIWGMGPIGLYAGRWAQILG 245
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,696,436
Number of Sequences: 5004
Number of extensions: 55427
Number of successful extensions: 151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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