Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M04
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   4.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   4.5  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   4.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   7.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.9  

>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 243 CSPCGRRLPSYGP 205
           C P GRRL S  P
Sbjct: 61  CDPVGRRLKSLAP 73


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 192 YAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYP 305
           Y+  +    V   H   ++ L  G+F  SC+   + +P
Sbjct: 102 YSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFP 139


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 243 CSPCGRRLPSYGP 205
           C P GRRL S  P
Sbjct: 61  CDPVGRRLKSLAP 73


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 251 FHDVRLVDGGYLLTAHLDRVIESEFRDT 168
           F     +DG +L    LD + E++F+DT
Sbjct: 345 FPSAPTIDGIFLPKHPLDLLREADFKDT 372


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 251 FHDVRLVDGGYLLTAHLDRVIESEFRDT 168
           F     +DG +L    LD + E++F+DT
Sbjct: 345 FPSAPTIDGIFLPKHPLDLLREADFKDT 372


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 287 DGEAVPQDPVREDDRGQLHDADGIE 361
           +GEAV +    +DD G   D D +E
Sbjct: 382 NGEAVGEVDEDDDDDGDDDDDDDVE 406


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 529 PTAPENMCRAPC 494
           P  PE++C  PC
Sbjct: 580 PEPPESVCSLPC 591


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,120
Number of Sequences: 438
Number of extensions: 3086
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)