Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M03
         (537 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8N1G2 Cluster: Protein KIAA0082; n=40; cellular organi...    33   3.1  
UniRef50_Q9VK29 Cluster: CG5458-PA; n=2; Sophophora|Rep: CG5458-...    32   9.6  

>UniRef50_Q8N1G2 Cluster: Protein KIAA0082; n=40; cellular
           organisms|Rep: Protein KIAA0082 - Homo sapiens (Human)
          Length = 835

 Score = 33.5 bits (73), Expect = 3.1
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -3

Query: 406 YLPYCGIVFQPLCSLRPITSRPSNAA*RGICAG 308
           YL YC   F+ +C  +PITSRP+N+    +C G
Sbjct: 418 YLLYC--CFERVCLFKPITSRPANSERYVVCKG 448


>UniRef50_Q9VK29 Cluster: CG5458-PA; n=2; Sophophora|Rep: CG5458-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 344

 Score = 31.9 bits (69), Expect = 9.6
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 342 GRDVIGRREHNGWKTIPQYGKYSLGNRYGTIMAYVIYIFSNNREAYWN*R---RRFRFVT 512
           GR+  G+R+  GW  +P   +Y    R G      +Y+F +    Y   R   R  R + 
Sbjct: 30  GRNAAGQRQGRGWAILPNGDQYDGNYRKGRRHGIGVYVFKDGSRYYGQYRCGKRCGRGIF 89

Query: 513 NIPDG 527
             PDG
Sbjct: 90  IYPDG 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,354,208
Number of Sequences: 1657284
Number of extensions: 9813128
Number of successful extensions: 21803
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21799
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)