Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_M03
         (537 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    25   0.32 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   1.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   1.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.2  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 415 PREYLPYCGIVFQPLCSLRPITSRPS 338
           P  Y P C  +++P C   P+++  S
Sbjct: 26  PEPYPPRCPPIYEPSCQYSPVSNSDS 51


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 247 PVDSKNSQETGYPP*VVRHAGLHRYLFTLHWKDVM 351
           PVDS +S   GYP    R     R  FT    DV+
Sbjct: 50  PVDSLHSSMAGYPAGNQRKQRRERTTFTRAQLDVL 84


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 171 LRSKRSIV*KNHLKLVILTCQCK 239
           L S  S++ KN+ ++V++ C C+
Sbjct: 350 LGSDGSVILKNYKEMVVVGCGCR 372


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 421 RLPREYLPYCGIVF 380
           R P++ +PYCG +F
Sbjct: 381 RHPQDEIPYCGKIF 394


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 294 DLRWIASLLTVLGIHWSIFYIDMLILRVLDDFSIQY 187
           D+ WI S     G++      D  +L +LDD+  +Y
Sbjct: 312 DVPWIVSFTNSEGLYAINEIYDNALLALLDDYWNEY 347


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 294 DLRWIASLLTVLGIHWSIFYIDMLILRVLDDFSIQY 187
           D+ WI S     G++      D  +L +LDD+  +Y
Sbjct: 312 DVPWIVSFTNSEGLYAINEIYDNALLALLDDYWNEY 347


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 215 RNINMSM*NIDQWIPRTVKRL 277
           RN+  S  N   W+P ++ RL
Sbjct: 798 RNVVFSSQNNTNWVPTSLNRL 818


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,854
Number of Sequences: 336
Number of extensions: 2583
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)