Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L24
(383 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684... 29 1.7
02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629... 29 1.7
01_03_0269 + 14442886-14442978,14443306-14443377,14443551-144440... 29 1.7
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 28 2.2
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 27 5.1
11_04_0203 - 14828009-14828110,14828171-14828269,14828375-148284... 27 6.7
06_01_0762 + 5699619-5699744,5699831-5699891,5699979-5700078,570... 27 6.7
11_01_0395 + 2999855-2999920,3000605-3002191 26 8.9
07_01_0121 - 924306-925838 26 8.9
06_01_0880 - 6752159-6752437,6752547-6752762 26 8.9
01_03_0286 - 14657682-14657803,14658194-14658419,14659894-146598... 26 8.9
>02_05_0854 -
32267047-32267298,32267383-32268194,32268289-32268421,
32268530-32268619
Length = 428
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 90 NAYPKPLITWKKRLSGADPNADVTDFDRR--ITAGPDGNLY 206
NA+ + L+ W R+ GA+ NA DF + + +G L+
Sbjct: 246 NAHRQELVNWVDRVGGANSNATAFDFTTKGILNVAVEGELW 286
>02_05_0853 +
32261705-32261794,32261895-32262027,32262117-32262928,
32263020-32263271
Length = 428
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 90 NAYPKPLITWKKRLSGADPNADVTDFDRR--ITAGPDGNLY 206
NA+ + L+ W R+ GA+ NA DF + + +G L+
Sbjct: 246 NAHRQELVNWVDRVGGANSNATTFDFTTKGILNVAVEGELW 286
>01_03_0269 +
14442886-14442978,14443306-14443377,14443551-14444045,
14444134-14444253
Length = 259
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 90 NAYPKPLITWKKRLSGADPNADVTDF 167
NA+ + L+ W R+ GA+ NA DF
Sbjct: 123 NAHRQELVNWVNRVGGANSNATAFDF 148
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 300 EYEIKGVTKDNSGYKGEPVPQYVSKDMM 383
E+ KG+TK + +G+P PQ+ S+D M
Sbjct: 16 EFMQKGITKLKNILEGKPEPQFSSEDYM 43
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 312 KGVTKDNSGYKGEPVPQYVSKDMM 383
KG+TK + +G+P PQ+ S+D M
Sbjct: 20 KGITKLKNILEGKPEPQFSSEDYM 43
>11_04_0203 -
14828009-14828110,14828171-14828269,14828375-14828461,
14828733-14829111,14829214-14829377,14829544-14829636,
14829843-14829989,14830065-14830166,14830392-14830490,
14830669-14830803,14830928-14831006,14831111-14831186,
14831281-14831370,14831723-14831798,14831880-14831914,
14832303-14832377,14832468-14832840
Length = 736
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 158 HISVRISSGQTFLPSNQGFRVSVRLHTVQLERPAFDWRFLVCLRWR 21
H S R+ + +L FR+ +R V+ A D R+ C+R+R
Sbjct: 376 HYSFRVYASVLYLKLPAYFRIILRGEEVKHHYIASDLRYTQCIRYR 421
>06_01_0762 +
5699619-5699744,5699831-5699891,5699979-5700078,
5700436-5700560,5700631-5700706,5701122-5701164
Length = 176
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 240 IYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEP 353
+Y++ K VDEE+ +V+ + VTK Y+G+P
Sbjct: 34 VYQFNIAPKKIGVDEEIFVVDLKKGEVTK--GPYEGKP 69
>11_01_0395 + 2999855-2999920,3000605-3002191
Length = 550
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -1
Query: 299 YQNYLFVDRCVLGGAYVFINVTDVFFSDDC-EVEVSIRP 186
Y YLF+D+C+ G V D D + VSI P
Sbjct: 227 YSTYLFMDKCMFGRRVEKEKVIDFLLCSDLPDTYVSILP 265
>07_01_0121 - 924306-925838
Length = 510
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = -1
Query: 374 LAYVLRDRLTFVPRVVFCHSLDLILYQNYLFVDRCVLGGAYVFINVTDVFFSDD 213
L L D FV + FC L Y +L +D+C+ G ++ + +D
Sbjct: 132 LQVTLEDMREFVIFLNFCPRLCRQPYSMHLLIDKCLFGRQMEMEHIMNFLLKED 185
>06_01_0880 - 6752159-6752437,6752547-6752762
Length = 164
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 282 EEVVLVEYEIKGVTKDNSGYKGEPVPQY 365
E V L+ + + G+T +SG EP P Y
Sbjct: 131 EPVKLLVHRLTGLTTGSSGLTAEPEPSY 158
>01_03_0286 -
14657682-14657803,14658194-14658419,14659894-14659899,
14661218-14661298,14662498-14662888,14663207-14663352,
14665455-14665562
Length = 359
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 111 ITWKKRLSGADPNADVTDFDRRITAGPD 194
+TWK+RL D V RR+ AG D
Sbjct: 199 LTWKERLRSRDGLFSVVACGRRLVAGRD 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,824,057
Number of Sequences: 37544
Number of extensions: 180735
Number of successful extensions: 505
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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