Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L23
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   2.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   2.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   2.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   2.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   2.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   2.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   2.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   2.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   2.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   8.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   8.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    20   8.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 59  DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 91


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 415 DCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 326
           D T S+   SP    T+GAP  +T     PSNS
Sbjct: 103 DSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 255 PLLANPQPRS*HLQHFR 205
           PLLAN    S HL H +
Sbjct: 99  PLLANGYNHSPHLSHMQ 115


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 307 VDSFVISPCICLTPGNAAIACKS 239
           V   +++ CIC  PG   +  +S
Sbjct: 195 VKGAMLTNCICFVPGVLGLLSRS 217


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 307 VDSFVISPCICLTPGNAAIACKS 239
           V   +++ CIC  PG   +  +S
Sbjct: 195 VKGAMLTNCICFVPGVLGLLSRS 217


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 307 VDSFVISPCICLTPGNAAIACKS 239
           V   +++ CIC  PG   +  +S
Sbjct: 195 VKGAMLTNCICFVPGVLGLLSRS 217


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 307 VDSFVISPCICLTPGNAAIACKS 239
           V   +++ CIC  PG   +  +S
Sbjct: 195 VKGAMLTNCICFVPGVLGLLSRS 217


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 73  HEVLSNCYKSMKSI 114
           H+ L N Y SMK +
Sbjct: 15  HDTLHNIYTSMKPV 28


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 73  HEVLSNCYKSMKSI 114
           H+ L N Y SMK +
Sbjct: 15  HDTLHNIYTSMKPV 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,996
Number of Sequences: 336
Number of extensions: 1942
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)