Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L22
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            28   0.28 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.64 
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   1.9  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   3.4  

>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = -2

Query: 585 HVNIINLLGCCTQDG----PLYVIVEYAPNGNLREFLRNHRLPY 466
           H NI+  +GC  +        ++I  Y  NG+L +FL+ H + +
Sbjct: 171 HPNILEFIGCEKRSDMASTDFWLITAYCENGSLCDFLKAHTVSW 214


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +1

Query: 451  RRLSRIRKSVVPQEFPQ-VTIRSVLHDNVQRPVLCT 555
            ++LS     V+  E P  V +R +L+D+++RP+L T
Sbjct: 1694 QQLSGQPVQVLEYESPDTVRVREILYDDIERPILQT 1729


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 315 GYGSLCWNPGFEYQQSVTGYVKGFSRRFWQGNTTHR 422
           G   L +  GF+  Q V G + G   R WQ   + R
Sbjct: 67  GLWRLSYLDGFDNGQRVCGMLSGIPHRKWQEEVSFR 102


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -2

Query: 588 KHVNIINLLGCCTQDG----PLYVIVEYAPNGNLREFL 487
           +H NI+  +    +D      L+++ +Y  NG+L +FL
Sbjct: 109 RHENILGFIAADNKDNGTWTQLWLVTDYHENGSLFDFL 146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,761
Number of Sequences: 2352
Number of extensions: 12298
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)