Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L22
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    36   4e-04
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -2

Query: 588 KHVNIINLLGCCTQDGPLYVIVEYAPNGNLREFLR 484
           +H N+I L G  T+  P+ +I E+  NG+L  FLR
Sbjct: 692 EHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLR 726


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 111 IYLINLTRSDFHRFLQEF--RISELSIRSTVLI 203
           I L+NLT  D   FLQ F  + S  ++   +LI
Sbjct: 12  ILLLNLTTQDVDGFLQGFPGKNSPYTVTQAILI 44


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 317 TEHPKRFFSRFRAFCILLSSCFD 249
           T   ++F  R+ A C  L  C D
Sbjct: 729 TARSEQFLCRYEAHCFALCHCCD 751


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = -2

Query: 546 DG-PLYVIVEYAPN 508
           DG PLYV V  APN
Sbjct: 944 DGEPLYVFVRSAPN 957


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,855
Number of Sequences: 438
Number of extensions: 3317
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)