Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L21
(395 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor pote... 31 1.8
BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor pote... 31 1.8
AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor pote... 31 1.8
AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor pote... 31 1.8
AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor pote... 31 1.8
AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor pote... 31 1.8
AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor pote... 31 1.8
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 1.8
>BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor potential
cation channel, subfamily C, member 6 protein.
Length = 931
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -1
Query: 242 IXENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKTS 84
I E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 804 INEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKRL 862
Query: 83 V*AAVADAPI 54
+ V A I
Sbjct: 863 IKRYVLQAQI 872
>BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor potential
cation channel, subfamily C, member 6 protein.
Length = 931
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -1
Query: 242 IXENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKTS 84
I E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 804 INEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKRL 862
Query: 83 V*AAVADAPI 54
+ V A I
Sbjct: 863 IKRYVLQAQI 872
>AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor
potential channel 6, variant delta377-431 protein.
Length = 876
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -1
Query: 242 IXENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKTS 84
I E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 749 INEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKRL 807
Query: 83 V*AAVADAPI 54
+ V A I
Sbjct: 808 IKRYVLQAQI 817
>AJ271067-1|CAC01685.1| 815|Homo sapiens transient receptor
potential channel 6, variant delta316-431 protein.
Length = 815
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -1
Query: 242 IXENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKTS 84
I E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 688 INEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKRL 746
Query: 83 V*AAVADAPI 54
+ V A I
Sbjct: 747 IKRYVLQAQI 756
>AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor potential
channel 6 protein.
Length = 931
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -1
Query: 242 IXENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKTS 84
I E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 804 INEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKRL 862
Query: 83 V*AAVADAPI 54
+ V A I
Sbjct: 863 IKRYVLQAQI 872
>AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor potential
protein protein.
Length = 931
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -1
Query: 242 IXENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKTS 84
I E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 804 INEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKRL 862
Query: 83 V*AAVADAPI 54
+ V A I
Sbjct: 863 IKRYVLQAQI 872
>AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor potential
protein 6 protein.
Length = 931
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -1
Query: 242 IXENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKTS 84
I E +KL +LGSHEDL K V + QP+++SS+ L F+ PPR+ +K
Sbjct: 804 INEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKRL 862
Query: 83 V*AAVADAPI 54
+ V A I
Sbjct: 863 IKRYVLQAQI 872
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 115 PESSHYD*RHRCERRSQMHQSCP*TCSPLRHR 20
P SH HRC RSQ +S P +C RHR
Sbjct: 274 PRKSHRHRHHRCPSRSQSSESRPSSCES-RHR 304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,761,824
Number of Sequences: 237096
Number of extensions: 910416
Number of successful extensions: 1652
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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