Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L19
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025998-1|AAH25998.1|  605|Homo sapiens family with sequence si...    32   1.8  
BC025409-1|AAH25409.1|  605|Homo sapiens family with sequence si...    32   1.8  
BC025397-1|AAH25397.1|  605|Homo sapiens family with sequence si...    32   1.8  
BC022035-1|AAH22035.1|  605|Homo sapiens family with sequence si...    32   1.8  
AY973323-1|AAY41236.1|  605|Homo sapiens HSD-51 protein.               32   1.8  
AK057543-1|BAB71526.1|  605|Homo sapiens protein ( Homo sapiens ...    32   1.8  
BC093660-1|AAH93660.1|  931|Homo sapiens transient receptor pote...    31   3.1  
BC093658-1|AAH93658.1|  931|Homo sapiens transient receptor pote...    31   3.1  
AJ271068-1|CAC01686.1|  876|Homo sapiens transient receptor pote...    31   3.1  
AJ271067-1|CAC01685.1|  815|Homo sapiens transient receptor pote...    31   3.1  
AJ271066-1|CAC01684.1|  931|Homo sapiens transient receptor pote...    31   3.1  
AJ006276-1|CAA06943.1|  931|Homo sapiens transient receptor pote...    31   3.1  
AF080394-1|AAC63289.2|  931|Homo sapiens transient receptor pote...    31   3.1  

>BC025998-1|AAH25998.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 4   AGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 147
           AGA  ++S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 331 AGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC025409-1|AAH25409.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 4   AGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 147
           AGA  ++S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 331 AGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC025397-1|AAH25397.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 4   AGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 147
           AGA  ++S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 331 AGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC022035-1|AAH22035.1|  605|Homo sapiens family with sequence
           similarity 71, member B protein.
          Length = 605

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 4   AGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 147
           AGA  ++S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 331 AGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>AY973323-1|AAY41236.1|  605|Homo sapiens HSD-51 protein.
          Length = 605

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 4   AGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 147
           AGA  ++S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 331 AGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>AK057543-1|BAB71526.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32981 fis, clone TESTI3000002, weakly similar to
           L.mexicana lmsap2 gene for secreted acid phosphatase 2
           (SAP2). ).
          Length = 605

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 4   AGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAG 147
           AGA  ++S+G S A+V    T  E    S  G+  L+    L AA AG
Sbjct: 331 AGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378


>BC093660-1|AAH93660.1|  931|Homo sapiens transient receptor potential
            cation channel, subfamily C, member 6 protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = -2

Query: 560  KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKK 402
            K  E +KL +LGSHEDL       K V +  QP+++SS+    L  F+ PPR+    +K+
Sbjct: 803  KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861

Query: 401  SV*AAVADAPI 369
             +   V  A I
Sbjct: 862  LIKRYVLQAQI 872


>BC093658-1|AAH93658.1|  931|Homo sapiens transient receptor potential
            cation channel, subfamily C, member 6 protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = -2

Query: 560  KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKK 402
            K  E +KL +LGSHEDL       K V +  QP+++SS+    L  F+ PPR+    +K+
Sbjct: 803  KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861

Query: 401  SV*AAVADAPI 369
             +   V  A I
Sbjct: 862  LIKRYVLQAQI 872


>AJ271068-1|CAC01686.1|  876|Homo sapiens transient receptor
           potential channel 6, variant delta377-431 protein.
          Length = 876

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = -2

Query: 560 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKK 402
           K  E +KL +LGSHEDL       K V +  QP+++SS+    L  F+ PPR+    +K+
Sbjct: 748 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 806

Query: 401 SV*AAVADAPI 369
            +   V  A I
Sbjct: 807 LIKRYVLQAQI 817


>AJ271067-1|CAC01685.1|  815|Homo sapiens transient receptor
           potential channel 6, variant delta316-431 protein.
          Length = 815

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = -2

Query: 560 KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKK 402
           K  E +KL +LGSHEDL       K V +  QP+++SS+    L  F+ PPR+    +K+
Sbjct: 687 KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 745

Query: 401 SV*AAVADAPI 369
            +   V  A I
Sbjct: 746 LIKRYVLQAQI 756


>AJ271066-1|CAC01684.1|  931|Homo sapiens transient receptor potential
            channel 6 protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = -2

Query: 560  KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKK 402
            K  E +KL +LGSHEDL       K V +  QP+++SS+    L  F+ PPR+    +K+
Sbjct: 803  KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861

Query: 401  SV*AAVADAPI 369
             +   V  A I
Sbjct: 862  LIKRYVLQAQI 872


>AJ006276-1|CAA06943.1|  931|Homo sapiens transient receptor potential
            protein protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = -2

Query: 560  KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKK 402
            K  E +KL +LGSHEDL       K V +  QP+++SS+    L  F+ PPR+    +K+
Sbjct: 803  KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861

Query: 401  SV*AAVADAPI 369
             +   V  A I
Sbjct: 862  LIKRYVLQAQI 872


>AF080394-1|AAC63289.2|  931|Homo sapiens transient receptor potential
            protein 6 protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = -2

Query: 560  KYLENEKL-VLGSHEDL------MKGVSNFFQPALKSSDVVGVLKRFSFPPRE*SLRLKK 402
            K  E +KL +LGSHEDL       K V +  QP+++SS+    L  F+ PPR+    +K+
Sbjct: 803  KINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQYQKIMKR 861

Query: 401  SV*AAVADAPI 369
             +   V  A I
Sbjct: 862  LIKRYVLQAQI 872


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,774,346
Number of Sequences: 237096
Number of extensions: 2086197
Number of successful extensions: 3768
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3768
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)