Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L17
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   2.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.2  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   7.3  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   7.3  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   7.3  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   7.3  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   7.3  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   7.3  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   7.3  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   7.3  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   7.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   9.6  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = -1

Query: 58  RTDTRNNLANIFV--CLLEDC 2
           R DT+NNL N +V   L+ DC
Sbjct: 50  RQDTKNNLLNAYVRFKLVTDC 70


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 422 QPRFQCQSIRH*KPAKYSSSSELQHCR 502
           QP F+C+  +     +Y S+  L H R
Sbjct: 418 QPAFRCKPSQRFASGRYYSAYSLHHVR 444


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 521 HVVHSGTDSVEVRNLRNIWQVFSGE 447
           H  H     V+V NLR   +V +GE
Sbjct: 39  HCSHCDRQFVQVANLRRHLRVHTGE 63


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 101 YNNNYNTNYKKLQYYNIINIEQIP 124


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 HNDNHDFSAKAFATKNLPNIPQVP 485
           +N+N++ + K     N+ NI Q+P
Sbjct: 97  YNNNYNTNYKKLQYYNIINIEQIP 120


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +1

Query: 442  KHSPLKTCQIFLKFRTSTLSVPEWTTCSRTRLVHLRPPLTPMSLIVMTTLW 594
            K +P+  CQ       + +++      S + LV  RPP  P  +I   T++
Sbjct: 1167 KSAPIH-CQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVY 1216


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/45 (22%), Positives = 18/45 (40%)
 Frame = +3

Query: 405 NLFHNDNHDFSAKAFATKNLPNIPQVPNFNTVGAGVDYMFKDKIG 539
           +L  N+N DF      +   P++   P  ++   G      D +G
Sbjct: 349 HLISNENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDFVG 393


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/40 (25%), Positives = 15/40 (37%)
 Frame = +3

Query: 108 YIEQYEDQPEQWANSRVRRQAGALTVNSDGTSGAMVKVPI 227
           Y      + E W N+ V R       NS+  + + V   I
Sbjct: 264 YFHSLASRVESWVNTSVIRNYTLFNENSEAAARSFVPFSI 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,836
Number of Sequences: 438
Number of extensions: 4105
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)