Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L16
(484 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 31 0.091
SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr 3||... 30 0.16
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 0.28
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 25 4.5
SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p... 25 4.5
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 25 4.5
SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyce... 25 7.9
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 25 7.9
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 7.9
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 31.1 bits (67), Expect = 0.091
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = +3
Query: 198 CQRANVLKNNCEYIPPCLHRPRCVNLPLCV--PLSKTFHCDDTLCNYTGDDKNTEFFHIP 371
C + C+Y C+ R C L P ++HCDD G ++FH
Sbjct: 187 CSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCK 246
Query: 372 RC 377
C
Sbjct: 247 TC 248
>SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr
3|||Manual
Length = 264
Score = 30.3 bits (65), Expect = 0.16
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +1
Query: 166 DIIRRVLWYHRVKGRTYLKTIVNIYLHAFTDLVVSIYLYVFRFQKLFIAMTHYAITPGMT 345
+++ V W H VK TI +YLH + +I L VF + I+MTH +T +
Sbjct: 30 ELVEAVTWRHPVKSMCLGLTITLLYLHPVS--FSAILLLVF-LTMMPISMTH-DVTTNLK 85
Query: 346 RIQN 357
+QN
Sbjct: 86 DLQN 89
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 29.5 bits (63), Expect = 0.28
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 408 KNHVDRWEYICI*ECERILYSCHPRCNCIMCH 313
K D E IC E I YSC CN MCH
Sbjct: 71 KEEQDEDEQICFICAEGITYSCVLPCNHRMCH 102
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 4.5
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 15 ETCTHEPPCELKPVCQILPDDSNKYCKPKIFKNPSLQKSSPRVI-RITKACRHHPPCTVV 191
+T H+ E DDS K + + NP+ + S P V+ + A H P T +
Sbjct: 56 QTVVHKEATENPTASSYRKDDSVKQNEKLLHSNPTFKISKPTVLEQPLNAIEHLSPETDL 115
Query: 192 PSCQRANVLK 221
S +K
Sbjct: 116 SSSAEQQFMK 125
>SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 4.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 48 KPVCQILPDDSNKYCK--PKIFKNPSLQKSSPRVIRITKACRHHPP 179
KP+ IL + + K P K+P+LQK + + HHPP
Sbjct: 106 KPLNPILGETFTGFWKFPPSNSKDPNLQKLHGIAVYAAEQVCHHPP 151
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 25.4 bits (53), Expect = 4.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 90 CKPKIFKNPSLQKSSPRVIRITKAC 164
C+PK+ + SSPR+ + K C
Sbjct: 103 CQPKVIIGYDTRPSSPRLAELLKVC 127
>SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 24.6 bits (51), Expect = 7.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 289 RFQKLFIAMTHYAITPGMTRIQNSFTFLDANIF 387
RF K ++ TH I P + +QN+ TF +F
Sbjct: 203 RFVKPALSPTHVFIRPPYSDMQNASTFNPETLF 235
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 24.6 bits (51), Expect = 7.9
Identities = 13/62 (20%), Positives = 26/62 (41%)
Frame = +3
Query: 54 VCQILPDDSNKYCKPKIFKNPSLQKSSPRVIRITKACRHHPPCTVVPSCQRANVLKNNCE 233
+C +++KY P+ + + R+TK P T VP + N L ++
Sbjct: 8 ICSTCQKNASKYRCPRCDSRFCCLECNLEHKRLTKCSGERDPATFVPKSKLVNHLNSDFN 67
Query: 234 YI 239
++
Sbjct: 68 FL 69
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 24.6 bits (51), Expect = 7.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 110 KPILTKIFAKGHKNNKSMPTSSA 178
K +L K GHK+N + PTS +
Sbjct: 123 KNLLEKAMHPGHKSNANSPTSES 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,239,166
Number of Sequences: 5004
Number of extensions: 50935
Number of successful extensions: 138
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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