Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L16
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 31 0.33
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 30 0.77
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 28 4.1
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 28 4.1
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 28 4.1
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 28 4.1
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 28 4.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 5.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 5.4
L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli... 27 5.4
AF022980-12|AAG24186.1| 515|Caenorhabditis elegans Hypothetical... 27 5.4
U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related ge... 27 7.1
AL032635-6|CAE18002.1| 193|Caenorhabditis elegans Hypothetical ... 27 7.1
AL032635-5|CAB63375.1| 260|Caenorhabditis elegans Hypothetical ... 27 7.1
AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical... 27 7.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 27 9.4
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 31.5 bits (68), Expect = 0.33
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Frame = +3
Query: 15 ETCTHEPPCELKPV-CQILPDDSNKYCKPKIFK--NPSLQKSSPRVIR---ITKACRHHP 176
+ C + C L V C P + C+PK + P +Q R +T C
Sbjct: 239 QNCPYNEECVLVQVTCIRAPCNPIPTCRPKDLRLIKPLIQPRERRQAGPSCMTARCGTPA 298
Query: 177 PCTVV-PSCQRANVLKNNCEYIPPCLHRPRCVNLPLCVPLSKTFH 308
C +V PS + ++ CE +P C+H C + V H
Sbjct: 299 GCAMVRPSGCIGSTVEKGCELMPMCIHVNACASTSCLVGSQCVLH 343
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 31.5 bits (68), Expect = 0.33
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Frame = +3
Query: 15 ETCTHEPPCELKPV-CQILPDDSNKYCKPKIFK--NPSLQKSSPRVIR---ITKACRHHP 176
+ C + C L V C P + C+PK + P +Q R +T C
Sbjct: 344 QNCPYNEECVLVQVTCIRAPCNPIPTCRPKDLRLIKPLIQPRERRQAGPSCMTARCGTPA 403
Query: 177 PCTVV-PSCQRANVLKNNCEYIPPCLHRPRCVNLPLCVPLSKTFH 308
C +V PS + ++ CE +P C+H C + V H
Sbjct: 404 GCAMVRPSGCIGSTVEKGCELMPMCIHVNACASTSCLVGSQCVLH 448
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 30.7 bits (66), Expect = 0.58
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 110 KPILTKIFAKGHKNNKSMPTSSAVYCGTIVSKGERT*KQL*IYTSMPSQTSL 265
KP+ +++ +G K+ P SSAV+ V+ + K++ I T ++ SL
Sbjct: 91 KPVPERVYVRGPYKKKNKPNSSAVFVQPQVTSPKEQQKRIDIITESDAELSL 142
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +3
Query: 27 HEPPCELKPVCQILPDDSNKYCK--PKIFKNPSLQKSSPRVIRITKACRHHPPCTVVPSC 200
H PP + KP+ Q + + P + P +Q++ P K PP P+
Sbjct: 41 HAPPAQAKPIVQQTQPAQKQQAQAPPAAQQIPVVQQAPPAQPAQQKPVAQAPPAQAKPTV 100
Query: 201 QRANVLKNNCEYIPP 245
Q+A +L PP
Sbjct: 101 QQAPILVAQAPPNPP 115
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
Frame = +3
Query: 21 CTHEPPCELKP-VCQILPDDSNKYCKPKIFKNPSLQK-SSPRVIRITKACRHHPPCTVVP 194
C + C K +C LPD + YC +I + + I C P T
Sbjct: 1934 CKNGGTCNPKTGLCVCLPDYTGDYCDNQIHSCSDINCFNGGTCIDYNATCACLPGTTG-- 1991
Query: 195 SCQRANVLKNNCE-YIPPCLHRPRCVNLPLCVPLSKTFHCDDTLCNYTG 338
R L C Y+P P C+N C+ L CD + N+ G
Sbjct: 1992 --DRCQYLGQPCTIYLPNGTATPYCLNEGKCLDLPNGAACDCSGTNFIG 2038
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = -2
Query: 309 NEKFLKAEHIEVD*HNEVCEGMEVYIHNCF*VRSPFDTMVPQYTADDVGMLL 154
N + + +H + +C+ +E Y NCF S + + PQ+ +D V +++
Sbjct: 419 NAQIMHLDHSPIMEAESICKNLEWY--NCFCSMSGLNMINPQFASDPVCIMM 468
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 225 NCEY-IPPCLHRPRCVNLPLCVPLSKTFHCDDTL 323
+C++ + C +P C N C + T+HCD TL
Sbjct: 136 HCQHLVDHCAKQP-CHNNATCTNMGATYHCDCTL 168
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = -2
Query: 309 NEKFLKAEHIEVD*HNEVCEGMEVYIHNCF*VRSPFDTMVPQYTADDVGMLL 154
N + + +H + +C+ +E Y NCF S + + PQ+ +D V +++
Sbjct: 419 NAQIMHLDHSPIMEAESICKNLEWY--NCFCSMSGLNMINPQFASDPVCIMM 468
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +3
Query: 204 RANVLKNNCEYIPP--CLHRPRCVNLPLCVPLSKTFHCDDTLCNYTGDDKNTEFFHIPRC 377
R+ +L + + P C HR + V KT HC NY + ++E P+
Sbjct: 1738 RSQILNKTIQLVSPSDCSHRSMLLQCETVVSC-KTCHCTQAWFNYMAFNNHSEETGFPQF 1796
Query: 378 KYIPICQHDSSTNDMGQHI 434
K + + + +H+
Sbjct: 1797 KNVDLANDYRRDFPLSRHL 1815
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +3
Query: 204 RANVLKNNCEYIPP--CLHRPRCVNLPLCVPLSKTFHCDDTLCNYTGDDKNTEFFHIPRC 377
R+ +L + + P C HR + V KT HC NY + ++E P+
Sbjct: 1738 RSQILNKTIQLVSPSDCSHRSMLLQCETVVSC-KTCHCTQAWFNYMAFNNHSEETGFPQF 1796
Query: 378 KYIPICQHDSSTNDMGQHI 434
K + + + +H+
Sbjct: 1797 KNVDLANDYRRDFPLSRHL 1815
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 39 CELKPVCQILPDDSNKYCKPKIFKNPSLQKSSPRVIRITKACRHHPPC 182
C+ KP C D++ YC + ++ R I K C H C
Sbjct: 2812 CDSKPDCADASDENPNYCNTRSCPEDYNLCTNRRCIDSAKKCNHIDDC 2859
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 39 CELKPVCQILPDDSNKYCKPKIFKNPSLQKSSPRVIRITKACRHHPPC 182
C+ KP C D++ YC + ++ R I K C H C
Sbjct: 2812 CDSKPDCADASDENPNYCNTRSCPEDYNLCTNRRCIDSAKKCNHIDDC 2859
>L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 8 protein.
Length = 2329
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 217 LKTIVNIYLHAFTDLVVSIYLYVFRFQKLFIAMTHYAITPGMTR----IQNSFTFLDANI 384
+ T+ + TDLV Y Y+F + F A PG + +++ T D N
Sbjct: 224 MSTLYRLANQLLTDLVDDNYFYLFDMKSFFTAKALNVAIPGGPKFEPLVKDLHTDEDWNE 283
Query: 385 FPSVNMILQR 414
F +N ++ R
Sbjct: 284 FNDINKVIIR 293
>AF022980-12|AAG24186.1| 515|Caenorhabditis elegans Hypothetical
protein T03D3.1 protein.
Length = 515
Score = 27.5 bits (58), Expect = 5.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 217 LKTIVNIY-LHAFTDLVVSIYLYVFRFQKLFIAMTHYAITPGMTR-IQNSFTFLDANIFP 390
L T+ ++Y + + S+Y +F +L HYAI+P M R N T N FP
Sbjct: 173 LPTVASVYGTSLYPEHDSSLYDKIFNLIRL--TYYHYAISPDMDRKYNNLITKRFGNNFP 230
Query: 391 SVNMI 405
V I
Sbjct: 231 DVGTI 235
>U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related genes
protein 1, isoformb protein.
Length = 349
Score = 27.1 bits (57), Expect = 7.1
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 DTETCTHEPPCELKPVCQILPDDSNKYCKPKIFKNPSLQKSSPRV-IRITKACRHHPPCT 185
D + C+H+ PC VC D C P F P + +V + + C+H C
Sbjct: 187 DIKFCSHQNPCANGGVCS---TDYKCQC-PSEFLGPRCETPVSKVHCTLERVCKHGGTCV 242
Query: 186 VVPSCQRANV 215
S R NV
Sbjct: 243 ---SVNRTNV 249
>AL032635-6|CAE18002.1| 193|Caenorhabditis elegans Hypothetical
protein Y51A2A.11 protein.
Length = 193
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 249 LHRPRCVNLPLCVPLSKTFHCDDTLCNYT 335
L + RCVN+ C P + TF DD N T
Sbjct: 103 LRKARCVNVAACAP-ANTFEWDDGHTNGT 130
>AL032635-5|CAB63375.1| 260|Caenorhabditis elegans Hypothetical
protein Y51A2A.7 protein.
Length = 260
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 249 LHRPRCVNLPLCVPLSKTFHCDDTLCNYT 335
L + RCVN+ C P + TF DD N T
Sbjct: 170 LRKARCVNVAACAP-ANTFEWDDGHTNGT 197
>AC024882-18|AAF60938.1| 392|Caenorhabditis elegans Hypothetical
protein Y9C9A.16 protein.
Length = 392
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 319 HYAITPGMTRIQNSFTFLDANIFPSVNMILQRTTWV 426
HY PG T + LD+N VN+I + TW+
Sbjct: 76 HY-YQPGFTLVGGGLMTLDSNRKKQVNLIPKGATWI 110
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 26.6 bits (56), Expect = 9.4
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 101 DFQKPILTKIFAKGHKNNKSMPTSSAVYCGTIVSKGERT*KQL*IYTSMPSQTSLCQSTS 280
DF K T + K +N + +PT+ Y ++V K R I + P Q LCQ +S
Sbjct: 3666 DFDKAKSTAV--KLLENGEQLPTAGK-YAVSVVGKSIRDVVSK-IKEAAPQQIKLCQESS 3721
Query: 281 MC 286
C
Sbjct: 3722 KC 3723
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +3
Query: 153 TKACRHHP-PCTVVPSCQRANVLKNNCE---YIPPCLHRPRCVNLPLCVPLSKTFHC 311
+K C H CT +P + + +C Y P C H CVN C + HC
Sbjct: 822 SKVCHHVTGTCTCLPG-KTGPLCDQSCAPNTYGPNCAHTCSCVNGAKCDESDGSCHC 877
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +3
Query: 153 TKACRHHP-PCTVVPSCQRANVLKNNCE---YIPPCLHRPRCVNLPLCVPLSKTFHC 311
+K C H CT +P + + +C Y P C H CVN C + HC
Sbjct: 822 SKVCHHVTGTCTCLPG-KTGPLCDQSCAPNTYGPNCAHTCSCVNGAKCDESDGSCHC 877
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,577,298
Number of Sequences: 27780
Number of extensions: 303104
Number of successful extensions: 931
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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