Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L14
         (331 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   120   2e-28
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    30   0.34 
U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical p...    30   0.45 
AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical ...    30   0.45 
AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical ...    30   0.45 
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    28   1.4  
U80437-10|AAN84839.1|  656|Caenorhabditis elegans Hypothetical p...    28   1.4  
U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical pr...    27   3.2  
AF036705-7|AAB95174.1|  324|Caenorhabditis elegans Hypothetical ...    27   3.2  
AF025464-3|AAB71016.3|  949|Caenorhabditis elegans Transporter o...    27   3.2  
U80441-1|AAB37651.1|  647|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U39854-3|AAA81078.2|  263|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z81529-12|CAB04303.1|  492|Caenorhabditis elegans Hypothetical p...    26   5.5  
AL023816-5|CAA19434.1|  492|Caenorhabditis elegans Hypothetical ...    26   5.5  
AF068713-18|AAC17791.2|   96|Caenorhabditis elegans Hypothetical...    26   5.5  
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ...    26   7.3  
Z78063-1|CAB01504.1|  161|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z77661-9|CAI46604.1|  345|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  120 bits (290), Expect = 2e-28
 Identities = 51/80 (63%), Positives = 69/80 (86%)
 Frame = +2

Query: 92  RIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNSMMRKAIKDHLETNPAL 271
           ++++L +EYPKC +VG DNVGS+QMQ+IR ++RGH+ +LMGKN+M+RKA++ HL  NP+L
Sbjct: 16  KLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSL 75

Query: 272 EKLLPHIKGNVGFVFTRGDL 331
           EKLLPHI  NVGFVFT+ DL
Sbjct: 76  EKLLPHIVENVGFVFTKEDL 95



 Score = 29.5 bits (63), Expect = 0.60
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +1

Query: 46 MGREDKATWKSNYFVQ 93
          M RED++TWK+NYF +
Sbjct: 1  MVREDRSTWKANYFTK 16


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +2

Query: 107 LDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNSMMRKAIKDHLETNPA--LEKL 280
           +D+Y   FI    N+ S +   IR   + +S    GKN+++  A+        A  L K 
Sbjct: 34  VDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKA 93

Query: 281 LPHIKGNVGFVFT 319
              +KG  G +FT
Sbjct: 94  SAILKGQCGLMFT 106


>U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical
           protein K09H11.7 protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +2

Query: 47  WVGRTRLPGSPITSFRIIQLLDEYPKCFIVGADN-VGSQQMQQIRISLRGHSIVLMGKNS 223
           W+G + +PGSP    R+I  L ++ K  IV  +N   S+ +   +++  G++   M KN+
Sbjct: 41  WLGESVMPGSP----RLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNN 96

Query: 224 MMRKA 238
           ++  A
Sbjct: 97  LVNPA 101


>AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical
           protein C53A3.2 protein.
          Length = 349

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +2

Query: 47  WVGRTRLPGSPITSFRIIQLLDEYPKCFIVGADN-VGSQQMQQIRISLRGHSIVLMGKNS 223
           W+G + +PGSP    R+I  L ++ K  IV  +N   S+ +   +++  G++   M KN+
Sbjct: 68  WLGESVMPGSP----RLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNN 123

Query: 224 MMRKA 238
           ++  A
Sbjct: 124 LVNPA 128


>AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical
           protein F44E7.2 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 0.45
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +2

Query: 47  WVGRTRLPGSPITSFRIIQLLDEYPKCFIVGADN-VGSQQMQQIRISLRGHSIVLMGKNS 223
           W+G + +PGSP    R+I  L ++ K  IV  +N   S+ +   +++  G++   M KN+
Sbjct: 58  WLGESVMPGSP----RLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNN 113

Query: 224 MMRKA 238
           ++  A
Sbjct: 114 LVNPA 118


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 181 FIAWSQHCAHGQKQHDEESHQG 246
           ++AW Q   H Q+QH ++  QG
Sbjct: 781 YLAWQQQRYHQQQQHQQQQQQG 802


>U80437-10|AAN84839.1|  656|Caenorhabditis elegans Hypothetical
           protein C43E11.11 protein.
          Length = 656

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 19/78 (24%), Positives = 40/78 (51%)
 Frame = +2

Query: 62  RLPGSPITSFRIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNSMMRKAI 241
           RL  + +T++R+IQ  D   K +   + +V + Q + +       +IV+  KNS+     
Sbjct: 406 RLTANQMTNYRLIQTADGITKRWPAESKSVTAIQKETL------DAIVIEVKNSIRAIVA 459

Query: 242 KDHLETNPALEKLLPHIK 295
           + H+ET    + + P+++
Sbjct: 460 RMHVETRGMTKSVAPYMQ 477


>U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical
           protein F42A10.1 protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 16  LRSPYFTQSKMGREDKATWKSNYFVQNHPTVGRIPKMFHSGCGQCRLATD 165
           +R  YFTQ  + + D  T      ++NHP  G+  + + +  G+  LA D
Sbjct: 560 IRIAYFTQHHVDQLDMETSAIEVLMKNHP--GKTQEDYRAALGRFGLAGD 607


>AF036705-7|AAB95174.1|  324|Caenorhabditis elegans Hypothetical
           protein F37C4.8 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 275 FRELDLFQDGP*WLSSSCCFCP*AQC 198
           F+ L+LF +   W   S C CP A C
Sbjct: 44  FQNLELFVEWSNWSCCSACCCPKAVC 69


>AF025464-3|AAB71016.3|  949|Caenorhabditis elegans Transporter of
           sr proteins protein1 protein.
          Length = 949

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 79  NYFVQNHPTVGRIPKMFHSGCG---QCRLATDATDPYFIAWSQHCA-HGQKQHDEES 237
           N+ ++N PT+  I  + H GCG   Q  +    T  +F  +   C+ HG   HD +S
Sbjct: 10  NFGLKN-PTICAIEHICHRGCGSYAQIFIFHSKTCNFFHFFKFFCSRHGASAHDAQS 65


>U80441-1|AAB37651.1|  647|Caenorhabditis elegans Hypothetical
           protein F27C1.6 protein.
          Length = 647

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 161 QMQQIRISLRGHSIVLMGKNSMMRKAIKDHLETNPALEKLL 283
           +M   RI  RG S+   G+N   ++ ++ H   NP ++KLL
Sbjct: 240 EMDLQRIMERG-SLKHRGQNQKFKQMLEKHASRNPEVKKLL 279


>U39854-3|AAA81078.2|  263|Caenorhabditis elegans Hypothetical
           protein W06B11.1 protein.
          Length = 263

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 10  KFLRSPYFTQSKMGREDKATWKSNYFVQNHPTVGRIPK 123
           +FL   Y  +  + + +K    SN+F+  HPTV   P+
Sbjct: 156 QFLEKYYDRKDLVWQSNKYALCSNFFIGRHPTVPFTPR 193


>Z81529-12|CAB04303.1|  492|Caenorhabditis elegans Hypothetical
           protein T05G11.1 protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 125 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNSMMRKAIKDHLETNPALEKL 280
           C   G D  + GS +  + R  + GH+ +L  +     + ++DH+++   ++K+
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKV 234


>AL023816-5|CAA19434.1|  492|Caenorhabditis elegans Hypothetical
           protein T05G11.1 protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 125 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNSMMRKAIKDHLETNPALEKL 280
           C   G D  + GS +  + R  + GH+ +L  +     + ++DH+++   ++K+
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKV 234


>AF068713-18|AAC17791.2|   96|Caenorhabditis elegans Hypothetical
           protein T24A6.1 protein.
          Length = 96

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 206 LMGKNSMMRKAIKDHLETNPALEKLL 283
           L+G  SMM K I+++L  NP +  +L
Sbjct: 5   LVGMTSMMIKKIRENLPNNPTVPDIL 30


>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
           protein Y66H1B.3 protein.
          Length = 1084

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 11  NFSEVPTSLNPRWVGRTRLPGSPITSF 91
           N  E P      W+ R RLPG PI++F
Sbjct: 147 NKEETPKQKLLNWI-RNRLPGMPISNF 172


>Z78063-1|CAB01504.1|  161|Caenorhabditis elegans Hypothetical
           protein F45D3.1 protein.
          Length = 161

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/42 (30%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = +2

Query: 182 SLRGHSIVLMGKN-SMMRKAIKDHLETNPALEKLLPHIKGNV 304
           S++ ++++L  +N +++R A+K  LE++ +LE L+ +  GN+
Sbjct: 10  SVKNYAVLLESENLNIVRCAVKWLLESDVSLELLIKYDIGNL 51


>Z77661-9|CAI46604.1|  345|Caenorhabditis elegans Hypothetical
           protein F40G12.15 protein.
          Length = 345

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 194 DHAMKYGSVASVASLHCPHPL 132
           D   KYGSV S+   +C H L
Sbjct: 2   DQIYKYGSVVSIPLYNCSHQL 22


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,610,494
Number of Sequences: 27780
Number of extensions: 173071
Number of successful extensions: 572
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)