Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L14
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.41 
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   0.96 
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   0.96 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.3  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   2.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   2.2  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   2.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   2.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   2.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   5.1  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   6.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   6.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   6.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    20   6.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   8.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   8.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   8.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 0.41
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 202 CAHGQKQHDEESHQGPS*NKSSSRKTASS 288
           C  G+  HD++    P  + SSS ++A S
Sbjct: 430 CLDGKLPHDDQPPLSPQSDSSSSSRSAES 458


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.0 bits (47), Expect = 0.96
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 120 GYSSNSWMILNEV 82
           G+ SNSW+ +NE+
Sbjct: 305 GFPSNSWVAINEL 317


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 23.0 bits (47), Expect = 0.96
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 120 GYSSNSWMILNEV 82
           G+ SNSW+ +NE+
Sbjct: 273 GFPSNSWVAINEL 285


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 43  KMGREDKATWKSNYFVQNHPTV 108
           K+G E+KA W  +  + N  T+
Sbjct: 332 KLGEEEKADWWKDIMLLNEKTL 353


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 43  KMGREDKATWKSNYFVQNHPTV 108
           K+G E+KA W  +  + N  T+
Sbjct: 332 KLGEEEKADWWKDIMLLNEKTL 353


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 43  KMGREDKATWKSNYFVQNHPTV 108
           K+G E+KA W  +  + N  T+
Sbjct: 332 KLGEEEKADWWKDIMLLNEKTL 353


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 310 KADISLDVRKQFFESWICFKMVLDG 236
           +ADI  D RK+   SW   K +  G
Sbjct: 22  EADIKKDCRKESKVSWAALKKMKAG 46


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 102 NCWTNTQN 125
           NCWT T+N
Sbjct: 240 NCWTQTEN 247


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 102 NCWTNTQN 125
           NCWT T+N
Sbjct: 111 NCWTQTEN 118


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 102 NCWTNTQN 125
           NCWT T+N
Sbjct: 240 NCWTQTEN 247


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +2

Query: 152 GSQQMQQIRISLRGHSIVLMGKNSMMRKAIKDHLETNPALEKLLP 286
           G+QQ  +++++L    +        MRK  ++   T+  L +++P
Sbjct: 356 GTQQSVELKLALDQEQLKSKKLEESMRKLDEEMKRTDELLYQMIP 400


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 123 FGYSSNSWMILNE 85
           F  SSN+W+ +NE
Sbjct: 430 FSSSSNTWLRVNE 442


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 123 FGYSSNSWMILNE 85
           F  SSN+W+ +NE
Sbjct: 430 FSSSSNTWLRVNE 442


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -3

Query: 197 CDHAMKYGSVASVASLHCPHPL 132
           C H    G  A +     PHP+
Sbjct: 435 CTHTTTNGCTAELRKKEPPHPI 456


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -3

Query: 197 CDHAMKYGSVASVASLHCPHPL 132
           C H    G  A +     PHP+
Sbjct: 421 CTHTTTNGCTAELRKKEPPHPI 442


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -3

Query: 197 CDHAMKYGSVASVASLHCPHPL 132
           C H    G  A +     PHP+
Sbjct: 455 CTHTTTNGCTAELRKKEPPHPI 476


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -3

Query: 197 CDHAMKYGSVASVASLHCPHPL 132
           C H    G  A +     PHP+
Sbjct: 404 CTHTTTNGCTAELRKKEPPHPI 425


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 4   VLKFLRSPYFTQSKM 48
           +LKFL+  Y   SK+
Sbjct: 343 ILKFLKQKYVKNSKL 357


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 238 HQGPS*NKSSSRKTASSHQG 297
           HQ PS N SS+      +QG
Sbjct: 632 HQSPSQNHSSAVPDQMPYQG 651


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 206 LMGKNSMMRKAIKDHLETNPALEKLLPH 289
           L GK+  + K IK  +E     ++ LP+
Sbjct: 110 LGGKHKFISKKIKKTMENKDITKRPLPN 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,042
Number of Sequences: 438
Number of extensions: 2198
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)