Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L13
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.   235   7e-64
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.1  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score =  235 bits (576), Expect = 7e-64
 Identities = 107/180 (59%), Positives = 124/180 (68%)
 Frame = +3

Query: 3   KPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXX 182
           + DNTYEVLIDNEKVESG LE DWDFLPPKKIKDPEAKKPEDW                 
Sbjct: 174 RADNTYEVLIDNEKVESGSLEDDWDFLPPKKIKDPEAKKPEDWDDRATIADPDDTKPEDW 233

Query: 183 XXXXHIPDPDASKXXXXXXXXXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWIHPEIDN 362
               HIPDPDA+K                IDNP+YKG W PKQIDNPAYKG W+HPEIDN
Sbjct: 234 DKPEHIPDPDATKPDDWDDEMDGEWEPPMIDNPEYKGEWKPKQIDNPAYKGVWVHPEIDN 293

Query: 363 PEYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAKEKGEIIKKMQEGEKKM 542
           PEY  D +LY R+E+C+VG+D+WQVKSGTIF+NF+ T+D   AK+    +K+ QEGEKK+
Sbjct: 294 PEYEEDKSLYLREEVCAVGIDVWQVKSGTIFDNFMITNDLEEAKKVAASVKETQEGEKKV 353


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +1

Query: 235 MMRWMESGNHL*STTPTTRASGHLNRLTTLHTRDHGSTRRLTILNTLQTR 384
           M+ W     HL    P T    HL   T+L +    STRR +   T QTR
Sbjct: 1   MIPWKHPTQHLFLDRPKTTVL-HLRTYTSLQSIAFFSTRRSSAHCTQQTR 49


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 433 CHKSRPTEHISSRLYRFESGVYSGLSISG 347
           C K   T  I  +L +FES   S L++ G
Sbjct: 491 CAKQSETTRIEKQLEQFESAPRSKLAVYG 519



 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 108  LDP*SSSEVGSPSRLLIHQIQPSHC 34
            L P   SEV + + L IH+  P+ C
Sbjct: 1094 LTPQDMSEVQATAELTIHRYVPARC 1118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,459
Number of Sequences: 2352
Number of extensions: 11851
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)