Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L12
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              38   1e-04
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   3.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   5.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +2

Query: 437 CTRNLEPVCASNGVTYNNECMMR---CHGGDHLT 529
           C R   PVCASNG  Y N C +    CH G  LT
Sbjct: 110 CPRRHRPVCASNGKIYANHCELHRAACHSGSSLT 143



 Score = 30.3 bits (65), Expect = 0.016
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
 Frame = +2

Query: 143 ECSRPLAPSLEMKHRG---ECQEVKVADIQPCICTREI----KQVCGSDGVTYGNPCLLN 301
           E SR + P    K+ G   EC+    + I  C+C R+     + VC S+G  Y N C L+
Sbjct: 74  ESSRSIDPCAS-KYCGIGKECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELH 132

Query: 302 -CATQSNPSLS 331
             A  S  SL+
Sbjct: 133 RAACHSGSSLT 143



 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 77  CTFIYAPVCGTDGNTYPNKCSL 142
           C   + PVC ++G  Y N C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 110 DGNTYPNKCSLECSRPLAPSLEMKHR 187
           DGN+Y N     CSR  +   + K R
Sbjct: 241 DGNSYRNDGERSCSRDRSREYKKKDR 266


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 119 CSRLCHRPGHI*RY-RRKDRLPHTY 48
           C RLC+R G + R+    + +P  Y
Sbjct: 247 CERLCNRLGRVKRFINWHEPIPEAY 271


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -1

Query: 374 PQPSLCCRKDPGVRCSSSGSTVWRNSTGTGC 282
           P PS  CR         SGS +W+      C
Sbjct: 47  PIPSYACRGRCSSYLQVSGSKIWQMERSCMC 77


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 210 TLTSWHSPRCFIS 172
           T  SWHSP   IS
Sbjct: 152 TEASWHSPEAHIS 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,074
Number of Sequences: 438
Number of extensions: 4195
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)