Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L09
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    62   4e-12
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.6  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 61.7 bits (143), Expect = 4e-12
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = +2

Query: 188 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 367
           G+ +  +R + +P V G +  H+ P       S      K  K P KRK++RF TRV+ +
Sbjct: 19  GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78

Query: 368 ERYKSGKNKWFFQKLRF 418
           E  KSG+NKWFFQK RF
Sbjct: 79  EGSKSGRNKWFFQKGRF 95


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 71  AGRKAIVVKNYDEGTSDKP 127
           AG+K   VK  DE   +KP
Sbjct: 73  AGKKPENVKKEDESDEEKP 91


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 221 KPFVKGVNYNHLMPTRYS 274
           K F   VN  HL+ T+Y+
Sbjct: 83  KNFTNIVNLTHLLETQYA 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,650
Number of Sequences: 336
Number of extensions: 2507
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)