Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L08
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid sphingomye... 131 5e-31
AF125964-6|AAD14755.2| 589|Caenorhabditis elegans Acid sphingom... 128 5e-30
Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical pr... 121 5e-28
Z70783-3|CAA94853.4| 755|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL021567-3|CAA16509.2| 650|Caenorhabditis elegans Hypothetical ... 31 0.54
Z75956-6|CAB61026.2| 472|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75954-8|CAB61020.2| 472|Caenorhabditis elegans Hypothetical pr... 29 2.9
AJ000259-1|CAA03975.1| 472|Caenorhabditis elegans osm-6 protein. 29 2.9
Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81503-2|CAB04112.1| 517|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid
sphingomyelinase protein 1 protein.
Length = 564
Score = 131 bits (316), Expect = 5e-31
Identities = 80/217 (36%), Positives = 104/217 (47%), Gaps = 8/217 (3%)
Frame = +1
Query: 28 CVSLKIQSARVCEGITRLFGSEVVYVLKRITI-GPDEICSFVIGDACGDVYNPYHE-WEV 201
C Q VC+GI+ F E YV +R+ P +IC ++ D C D +P W V
Sbjct: 72 CKLFAKQPWAVCDGISSQFRDEFFYVFRRLANESPSQICGIILPD-CADPTDPSESGWMV 130
Query: 202 AFPPVPKPAVRPLDAPIDKAPTFK------VLQISDTHFDPYYAEGANADCNEPLCCRAS 363
A PP PK R + K P VLQ++D H D Y + A+C++P+CCR S
Sbjct: 131 ALPPKPK-RTRISKKKVQKKPNMSMSQNLNVLQLTDLHVDFEYKYPSEANCDDPVCCRVS 189
Query: 364 SGPLRTPDSGAGRWGDYRKCDTPKRTIDHMLKHIADTHTDIDYILWTGDLPPHDVWNQTK 543
+ P AG WG KCD P T+++ML HI TH ID ++ TGD H W +
Sbjct: 190 ---VSEPKKAAGYWGSVGKCDIPFWTVENMLSHINKTHM-IDMVIMTGDYINHVDWEYSI 245
Query: 544 EEHLQVFKKRLLKCLICFREYQFSQLSGNHESSPVNS 654
EEHL V +K F GNHE PVNS
Sbjct: 246 EEHLSVLRKLHRLVQNTFPSTPIYWALGNHEGVPVNS 282
>AF125964-6|AAD14755.2| 589|Caenorhabditis elegans Acid
sphingomyelinase protein 3 protein.
Length = 589
Score = 128 bits (308), Expect = 5e-30
Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Frame = +1
Query: 28 CVSLKIQSARVCEGITRLFGSEVVYVLKRITIGPDEICSFVIGDACGDVYNPYHE-WEVA 204
C + I+ VC I F E +YV+K+I + P ++C ++ + CGD +P W +
Sbjct: 52 CETFHIEDNDVCNFIISDFSDEFMYVIKQILVTPHQLCGLLMKNDCGDFVDPLATIWNMT 111
Query: 205 FPPVPKPAVRPLDAPIDKAPTFKVLQISDTHFDPYYAEGANADCNEPLCCRASSGPLRTP 384
P P V P PT + L ++D H D +Y G ADC P CCR +
Sbjct: 112 IPGNQPPFVPKQVVPPGN-PTLRALHLTDLHVDMFYTVGLEADCGTPQCCRPQDMNVEIV 170
Query: 385 DSG-----AGRWGDYRKCDTPKRTIDHMLKHIADTHTDIDYILWTGDLPPHDVWNQTKEE 549
++G AG WG CDTP + +ML++IA T +DYI+ +GDL H VW T E
Sbjct: 171 ENGDVKQPAGPWGSVGSCDTPYWLLTNMLQNIASTAGKLDYIMVSGDLVSHTVWAYTPET 230
Query: 550 HLQVFKKRLLKCLICFREYQFSQLSGNHESSPVNS 654
H + K F + GNHE PV++
Sbjct: 231 HSFMVKNLSDTIRSYFPKTPVYFAVGNHEGVPVDN 265
>Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical
protein ZK455.4 protein.
Length = 618
Score = 121 bits (291), Expect = 5e-28
Identities = 77/232 (33%), Positives = 101/232 (43%), Gaps = 17/232 (7%)
Frame = +1
Query: 1 EINKMIYQFCVSLKIQSARVCEGITRLFGSEVVYVLKRITIGPDEICSFVIGDACGDVYN 180
EI + C ++ VC+ I F EVV+VL+R P+EIC I + CG
Sbjct: 94 EIAAFLVNLCDLFDVEQPHVCKNIIYAFKDEVVFVLERSVFTPEEICGAFIAN-CGHSDK 152
Query: 181 PY-HEWEVAFPPVPKPAVRPLDAPIDKAPTFKVLQISDTHFDPYYAEGANADCN------ 339
P H W + P KP ++P D PTFKVL +SD H D Y G A C
Sbjct: 153 PLTHMWNITIPG-GKPPIKPWPKIPDNKPTFKVLHLSDIHIDHQYVVGTEAYCQLDSALG 211
Query: 340 -EPLCCR-----ASSGPLRTPDSG----AGRWGDYRKCDTPKRTIDHMLKHIADTHTDID 489
+CCR + P D AG WG CD P +T + +KHI+ T D+D
Sbjct: 212 TYAMCCRDYSQDSQGAPTNLKDKPIYVPAGPWGMPYLCDLPYQTFESAMKHISKTFKDLD 271
Query: 490 YILWTGDLPPHDVWNQTKEEHLQVFKKRLLKCLICFREYQFSQLSGNHESSP 645
YI+ TGD HD W+ T++ + L F GNHE P
Sbjct: 272 YIIITGDFEAHDSWDYTEDLTRENMNNMTNVFLEYFPGVPVYVSIGNHEGVP 323
>Z70783-3|CAA94853.4| 755|Caenorhabditis elegans Hypothetical
protein ZK856.5 protein.
Length = 755
Score = 42.7 bits (96), Expect = 2e-04
Identities = 37/128 (28%), Positives = 54/128 (42%)
Frame = +1
Query: 268 FKVLQISDTHFDPYYAEGANADCNEPLCCRASSGPLRTPDSGAGRWGDYRKCDTPKRTID 447
++VL ++D H D Y+ N D N+ +C G R ++ G +GDY CD PK I
Sbjct: 21 YQVLHLADFHLDVQYS--INGD-NKHMC--HDDGTER--NTTLGEYGDYM-CDAPKPLIQ 72
Query: 448 HMLKHIADTHTDIDYILWTGDLPPHDVWNQTKEEHLQVFKKRLLKCLICFREYQFSQLSG 627
+ A + D I+WTGD H + E L + F G
Sbjct: 73 LAIDESARIFPNPDLIIWTGDNVAH-IDGYGWEIVLDAVNQTTSLLFSRFPNQTILPTFG 131
Query: 628 NHESSPVN 651
NH+ +P N
Sbjct: 132 NHDYAPSN 139
>AL021567-3|CAA16509.2| 650|Caenorhabditis elegans Hypothetical
protein F21A10.4 protein.
Length = 650
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 214 VPKPAVRPLDAPIDKAPTFKVLQISDTHFDPYYAEGANAD 333
+PK ++ +D P ++ P F+V+ D H PY+ E N D
Sbjct: 607 IPKHSLI-VDEPFEELPEFEVVLEDDIHEHPYWVERINTD 645
>Z75956-6|CAB61026.2| 472|Caenorhabditis elegans Hypothetical
protein R31.3 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 569 NGCSNV*YVSGSTNFPSSREIMNLHQ 646
N SNV SGST+FP+SR + H+
Sbjct: 179 NRMSNVVLSSGSTSFPTSRPVAAFHE 204
>Z75954-8|CAB61020.2| 472|Caenorhabditis elegans Hypothetical
protein R31.3 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 569 NGCSNV*YVSGSTNFPSSREIMNLHQ 646
N SNV SGST+FP+SR + H+
Sbjct: 179 NRMSNVVLSSGSTSFPTSRPVAAFHE 204
>AJ000259-1|CAA03975.1| 472|Caenorhabditis elegans osm-6 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 569 NGCSNV*YVSGSTNFPSSREIMNLHQ 646
N SNV SGST+FP+SR + H+
Sbjct: 179 NRMSNVVLSSGSTSFPTSRPVAAFHE 204
>Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical
protein K04D7.3 protein.
Length = 483
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 502 TGDLPPHDVWNQTKEEHLQVFKKRLL 579
TGD+ HD WN + + F K+LL
Sbjct: 319 TGDIWAHDHWNLSSPPDMVTFSKKLL 344
>Z81503-2|CAB04112.1| 517|Caenorhabditis elegans Hypothetical
protein F14F7.2 protein.
Length = 517
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 225 WFW-YWRKCDLPLVIWIIYV--AASVADHETAYLIWSYSYTFQY 103
W W YWR+C +P ++ A + DHE + +T QY
Sbjct: 20 WTWTYWRRCGIPGPQGYPFLGSALDMMDHENPPFLQLKKWTSQY 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,498,499
Number of Sequences: 27780
Number of extensions: 385986
Number of successful extensions: 1224
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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