Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L08
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    27   0.16 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    27   0.16 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.8  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 282 NFRYTFRSILC*RCECRLQRTTL 350
           +FR+ F+SI+C +C C+ +  TL
Sbjct: 68  DFRFAFKSIIC-KCFCKRRTNTL 89


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 282 NFRYTFRSILC*RCECRLQRTTL 350
           +FR+ F+SI+C +C C+ +  TL
Sbjct: 516 DFRFAFKSIIC-KCFCKRRTNTL 537


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 348 KWFVAVGIRTFSIIW 304
           KWF ++ IRT  +IW
Sbjct: 423 KWFNSLDIRTEELIW 437


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 348 KWFVAVGIRTFSIIW 304
           KWF ++ IRT  +IW
Sbjct: 513 KWFNSLDIRTEELIW 527


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 575 CSNV*YVSGSTNFPSSREIMNLHQLIV 655
           CS+V +   S N  S + + +LH+L V
Sbjct: 73  CSDVHHFESSFNAQSWQRLTSLHELHV 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,209
Number of Sequences: 438
Number of extensions: 4544
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)