Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L07
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.6  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   5.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   6.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.7  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   8.7  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
 Frame = +2

Query: 437 GGQSAPGPLRCTQH------AGVFCLRAYTFGVPKTQRAAGQY 547
           GG+  PGP R  +H      AG   ++     VP     AG Y
Sbjct: 327 GGRRGPGPARSRRHLPAHLVAGTCFVQLIGMRVPPEMMQAGDY 369



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 233 LLGLSWENYRPPSP 192
           LL L+W+   PPSP
Sbjct: 61  LLPLAWQANSPPSP 74


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 445 LPTIRIPPLSTKYVSIICS 389
           +P   IPPLST   S +C+
Sbjct: 195 IPRSYIPPLSTSMRSHLCN 213


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 445 LPTIRIPPLSTKYVSIICS 389
           +P   IPPLST   S +C+
Sbjct: 355 IPRSYIPPLSTSMRSHLCN 373


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 445 LPTIRIPPLSTKYVSIICS 389
           +P   IPPLST   S +C+
Sbjct: 355 IPRSYIPPLSTSMRSHLCN 373


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/26 (23%), Positives = 18/26 (69%)
 Frame = +3

Query: 99  FLINCISYDYHSVYPYIVVYNMTPVA 176
           F+++C +  +  +Y +IV+Y ++ ++
Sbjct: 152 FMLHCNNTTWRCLYRWIVLYTLSKMS 177


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 105 INCISYDYHS 134
           IN +SYDYH+
Sbjct: 197 INIMSYDYHT 206


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 467 NEAVQGRFAHHQNPTTQH 414
           N A+    A+H NPT  H
Sbjct: 46  NHAMHPYHANHVNPTANH 63


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 57   VNAGKVLEGLKLYFFLINCISYDYHSVYPYI 149
            V+AG  +  L  Y   I  + YDYH  +  I
Sbjct: 1994 VDAGYDVPTLSKYLDWIAVMCYDYHGQWDKI 2024


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 346 QYATREHDIEFHLMHY 393
           +Y T E + EFH  HY
Sbjct: 232 RYQTLELEKEFHTNHY 247


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 346 QYATREHDIEFHLMHY 393
           +Y T E + EFH  HY
Sbjct: 14  RYQTLELEKEFHTNHY 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,965
Number of Sequences: 336
Number of extensions: 4417
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)