Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L06
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0034 - 12663290-12663355,12663437-12663566,12663903-126639... 173 1e-43
06_03_0297 + 19267491-19267677,19267799-19267843,19268466-192685... 154 6e-38
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872... 153 8e-38
02_02_0206 - 7771835-7771913,7772083-7772219,7772364-7772422,777... 114 6e-26
03_06_0220 + 32452831-32452944,32453618-32453911,32454416-324545... 33 0.17
01_06_0930 + 33134385-33138257 32 0.30
06_03_1040 + 27082978-27083086,27083574-27083632,27083759-270838... 31 0.70
03_01_0184 - 1479520-1479649,1479889-1479938,1480519-1480683,148... 31 0.70
04_03_0859 + 20367738-20368391 31 0.92
04_04_0047 + 22346962-22347437,22347874-22348036,22348143-223482... 30 1.6
04_03_0669 + 18531419-18531820,18532589-18532690,18532882-185329... 30 1.6
12_02_0170 - 14871985-14872110,14872239-14872454,14872541-148725... 29 2.1
02_01_0383 + 2776526-2776632,2777579-2777835,2777915-2778366,277... 28 4.9
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 28 4.9
08_01_0608 - 5339541-5340177,5340555-5340877 28 6.5
05_07_0246 + 28634530-28634735,28634841-28634901,28634996-286350... 28 6.5
08_01_0458 + 4046809-4047099,4047269-4047321,4047332-4047722,404... 27 8.6
07_01_0166 + 1164903-1165144,1165839-1166074,1166719-1166781,116... 27 8.6
03_05_0249 - 22368986-22369627,22374000-22374890 27 8.6
>07_03_0034 -
12663290-12663355,12663437-12663566,12663903-12663990,
12664106-12664178,12666144-12666248,12667610-12667732,
12667821-12667897,12668877-12669006
Length = 263
Score = 173 bits (420), Expect = 1e-43
Identities = 75/142 (52%), Positives = 107/142 (75%)
Frame = +2
Query: 101 WFTETCEMWPGGTFTFEVNEVLHSEQSEYQYIQVFDTTSYGRVLVLDGIIQCTQKDEFSY 280
WF+E MWPG + +V +VL +S+YQ + VF +++YG+VLVLDG+IQ T++DE +Y
Sbjct: 34 WFSEISPMWPGEAHSLKVEKVLFQGKSDYQNVMVFQSSTYGKVLVLDGVIQVTERDECAY 93
Query: 281 QEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPF 460
QEMI+ LPLC K+P++VL++GGGDGGV REV++H V++I EID V++VSK++ P
Sbjct: 94 QEMITHLPLCSIKDPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVDVSKQFFPH 153
Query: 461 LAVGFESEKLELHVGDGFESLK 526
LAVGFE ++ LH+GDG LK
Sbjct: 154 LAVGFEDPRVSLHIGDGVAFLK 175
>06_03_0297 +
19267491-19267677,19267799-19267843,19268466-19268542,
19268652-19268774,19269029-19269133,19269217-19269289,
19269588-19269690,19269890-19270144,19270996-19271125,
19271278-19271352,19271470-19271550
Length = 417
Score = 154 bits (373), Expect = 6e-38
Identities = 69/135 (51%), Positives = 98/135 (72%)
Frame = +2
Query: 122 MWPGGTFTFEVNEVLHSEQSEYQYIQVFDTTSYGRVLVLDGIIQCTQKDEFSYQEMISFL 301
MWPG + +V +L+ +S YQ I VF++++YG VLVLDGI+Q T+KDE +YQEM++ L
Sbjct: 75 MWPGEAHSLKVENILYQGKSPYQEILVFESSTYGNVLVLDGIVQLTEKDECAYQEMVTHL 134
Query: 302 PLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFES 481
PLC +P+ VL+VGGGDGGV RE+A+H V+ I EID VI+V K + P L+VGF+
Sbjct: 135 PLCSIPSPKSVLVVGGGDGGVLREIARHASVENIDICEIDQLVIDVCKDFFPQLSVGFKD 194
Query: 482 EKLELHVGDGFESLK 526
+++LHVGD + L+
Sbjct: 195 PRVQLHVGDAVDFLR 209
>02_02_0299 -
8726024-8726101,8726460-8726534,8726836-8726965,
8727406-8727601,8727894-8727965,8728087-8728159,
8728240-8728344,8728502-8728624,8728730-8728806,
8729064-8729108,8729214-8729433
Length = 397
Score = 153 bits (372), Expect = 8e-38
Identities = 68/135 (50%), Positives = 98/135 (72%)
Frame = +2
Query: 122 MWPGGTFTFEVNEVLHSEQSEYQYIQVFDTTSYGRVLVLDGIIQCTQKDEFSYQEMISFL 301
MWPG + +V ++L+ +S YQ + VF++++YG+VLVLDGI+Q T KDE +YQEMI+ L
Sbjct: 86 MWPGEAHSLKVEKILYQGKSPYQEVLVFESSTYGKVLVLDGIVQLTDKDECAYQEMITHL 145
Query: 302 PLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFES 481
PLC +P++VL++GGGDGGV RE+ +H V+ I EID VI+V K + P L+VGF+
Sbjct: 146 PLCSIPSPKKVLVIGGGDGGVLREICRHGSVESIDICEIDQLVIDVCKDFFPDLSVGFKD 205
Query: 482 EKLELHVGDGFESLK 526
++ LHVGD E L+
Sbjct: 206 PRVRLHVGDAVEFLR 220
>02_02_0206 -
7771835-7771913,7772083-7772219,7772364-7772422,
7772535-7772610,7772717-7772873,7773241-7773329,
7773648-7773750,7773919-7774013,7774301-7774367,
7774894-7775066
Length = 344
Score = 114 bits (274), Expect = 6e-26
Identities = 57/153 (37%), Positives = 89/153 (58%)
Frame = +2
Query: 92 KNNWFTETCEMWPGGTFTFEVNEVLHSEQSEYQYIQVFDTTSYGRVLVLDGIIQCTQKDE 271
++ W+ E E+ + +N VLH S+YQ I + DT +G+ L++DG +Q T+ DE
Sbjct: 38 ESKWYEE--EIDDDLKLCYALNSVLHRGASKYQEIALIDTKHFGKALIIDGKMQSTEVDE 95
Query: 272 FSYQEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKY 451
F Y E + PL H NP+ V I+GGG+G AREV +H V ++V +ID +V++ + Y
Sbjct: 96 FIYHESLIHPPLLFHPNPKTVFIMGGGEGSAAREVLRHNTVHRVVMCDIDQEVVDFCRTY 155
Query: 452 LPFLAVGFESEKLELHVGDGFESLKEHSQEFDV 550
L F S+KL L + D L++ ++FDV
Sbjct: 156 LTVNWDAFASDKLCLIINDARAELEKSREKFDV 188
>03_06_0220 +
32452831-32452944,32453618-32453911,32454416-32454503,
32454596-32454717,32454985-32455142,32455201-32455273,
32455552-32455640,32455753-32455858,32455967-32456179,
32456726-32456920,32457051-32457128,32457209-32457523
Length = 614
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 392 VKKIVQVEIDAKVIEVSKKYLPFLAVGFESEKLELHVGDGFESLKEHSQEFDV 550
++K+V ++ID IE K+ + F S K+E H+ D + H +EFDV
Sbjct: 155 LEKVVALDIDKACIEACKRNIKFNGASAMS-KIEPHLTDARVYMLTHPKEFDV 206
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 95 NNWFTETCEMWPGGTFTFEVNEVLHSEQSEYQYI-QVFDTTSYGRVLVLDGIIQCTQKDE 271
NN T+ +W + + ++ L SE S + + ++ DT G + ++ ++ ++DE
Sbjct: 884 NNLETQLVLIWEANSDS-DIRSTLSSEHSSMKKLTELMDTDMSGNLQTIESALEI-ERDE 941
Query: 272 FSYQEMISFLPLCCHKNPERVL 337
+E I + LCCH+ R +
Sbjct: 942 ALVKEDIIKVWLCCHEERMRFI 963
>06_03_1040 +
27082978-27083086,27083574-27083632,27083759-27083833,
27083908-27084024,27084207-27084277,27084432-27084732,
27084949-27085238,27085779-27085833
Length = 358
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 344 GGGDGGVAREVAKHPKVKKIVQVEIDA 424
GGG GG AR K PK K Q E+ A
Sbjct: 21 GGGGGGAARRNTKMPKYSKFTQQELPA 47
>03_01_0184 -
1479520-1479649,1479889-1479938,1480519-1480683,
1481287-1481339,1481805-1481934,1482189-1482266,
1482583-1482642,1483428-1483480,1483574-1483895
Length = 346
Score = 31.1 bits (67), Expect = 0.70
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 275 SYQEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKY- 451
SY + LP + P V ++G G G A + K ++V EID K+IE+S+ Y
Sbjct: 123 SYWDEFVSLPAVVPRGP--VALLGLGAGTAAHLMLKFYPWLQLVGWEIDPKIIELSRDYF 180
Query: 452 -LPFLAVGFES-EKLELHVGD 508
L L ES L + +GD
Sbjct: 181 GLSDLEKATESGGSLSVRIGD 201
>04_03_0859 + 20367738-20368391
Length = 217
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 308 CCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQ-VEID 421
CC + P+R G D AR++ P KK++ +E+D
Sbjct: 178 CCARRPDRTTTPPGPDDDAARQIQPSPGAKKLLLIIELD 216
>04_04_0047 +
22346962-22347437,22347874-22348036,22348143-22348217,
22348302-22348402,22348488-22348603,22348693-22348904,
22349033-22349124,22349319-22349433,22349654-22349757,
22349881-22349926,22350007-22350071,22350192-22350272,
22350356-22350410,22350623-22350711,22350802-22350889,
22351011-22351091
Length = 652
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 329 RVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKY 451
RVL+ GGG GG+ +A K ++V +E D + KY
Sbjct: 72 RVLVAGGGIGGLVFALAAKRKGFEVVVLERDMSAVRGEGKY 112
>04_03_0669 +
18531419-18531820,18532589-18532690,18532882-18532948,
18533530-18533708,18533792-18534052,18535324-18535407,
18535517-18535564,18535654-18535718,18536849-18536897,
18538132-18538372,18539623-18539744,18539942-18540022,
18540094-18540168,18540408-18540550,18540662-18540812,
18540915-18541097
Length = 750
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 410 VEIDAKVIEVSKKYLPFLAVGFESEKLELHVGDGFESLKE 529
VE+D V EV+ KY F E+L++H+GDG + + +
Sbjct: 569 VELDPLVEEVANKYFGFST----DEQLQVHLGDGIKFIDD 604
>12_02_0170 -
14871985-14872110,14872239-14872454,14872541-14872588,
14872960-14873061,14873144-14873254,14873388-14873483,
14873579-14873697,14874014-14874095,14874149-14874218,
14874320-14874382,14874487-14874602,14874731-14874817
Length = 411
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 355 WWCCKGSRKTS*SK 396
WWCC G+R+T SK
Sbjct: 110 WWCCAGNRRTEMSK 123
>02_01_0383 +
2776526-2776632,2777579-2777835,2777915-2778366,
2778845-2779102
Length = 357
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = +2
Query: 317 KNPERVLIVGGGDGGV--AREVAKHPKVKKIVQVEIDAKVIE-----VSKKYLPFL 463
++ E VLI+GGG GV A E+A KK+ V ++++E SKK L +L
Sbjct: 127 ESSESVLIIGGGPTGVELAGEIAVDYPEKKVTLVHRGSRLLEFIGDKASKKCLDWL 182
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 95 NNWFTETCEMWPGGTFTFEVNEVLHSEQSEYQYI-QVFDTTSYGRVLVLDGIIQCTQKDE 271
+N T+ +W + + ++ L SE S + + ++ DT G + ++ ++ ++DE
Sbjct: 1066 SNLETQLVLIWEADSDS-DIRRTLLSEHSSMKKLTELMDTDISGNLQTIESALKI-ERDE 1123
Query: 272 FSYQEMISFLPLCCHKNPERVL 337
+E I + LCCH+ R +
Sbjct: 1124 ALVKEDIIKVWLCCHEERMRFI 1145
>08_01_0608 - 5339541-5340177,5340555-5340877
Length = 319
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 371 EVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFESEKLELHVGDGFESLK 526
++A K + ++ V D V + F+A F + KL HVGD +LK
Sbjct: 62 DIAAMKKKRAVLCVMADEAVKRADGQLEAFMAGAFVTNKLLKHVGDSSPTLK 113
>05_07_0246 +
28634530-28634735,28634841-28634901,28634996-28635088,
28635326-28635391,28635506-28635576,28636225-28636329,
28637065-28637134
Length = 223
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 401 IVQVEIDAKV-IEVSKKYLPF-LAVGFESEKLELHVGDGFESLKEH 532
+V ++ KV +++ Y+ F L + K+ + GDGF +LKE+
Sbjct: 77 LVNIQFQKKVQLQLVVVYVDFKLDESYTPSKISVRAGDGFHNLKEY 122
>08_01_0458 +
4046809-4047099,4047269-4047321,4047332-4047722,
4047998-4048291
Length = 342
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 320 NPERVLIVGGGDGGVAREVAK-HPKVKKIV 406
N ++ VGGGDG +AR + K P +K +V
Sbjct: 180 NVSSLVDVGGGDGSMARAIVKAFPHIKCLV 209
>07_01_0166 +
1164903-1165144,1165839-1166074,1166719-1166781,
1166808-1167017,1167098-1167263,1167537-1167780,
1167970-1168362
Length = 517
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +2
Query: 338 IVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFESEKLELHVGDGFE 517
+VG D + K + + + + +E +K + V E E ++ +GD F+
Sbjct: 203 MVGDEDDSDLDQAWKMLDIARAIVEKSPDDTLEKAKIFSALAEVSMEREDIDNSLGDYFK 262
Query: 518 SLKEHSQEFDVDHHR 562
+L + F+ DH R
Sbjct: 263 ALAILEKLFEPDHRR 277
>03_05_0249 - 22368986-22369627,22374000-22374890
Length = 510
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 362 VAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFL 463
V +A HP V+ Q EIDA + LP+L
Sbjct: 314 VLARMALHPDVQSKAQAEIDAAAVSGDAAALPYL 347
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,781,090
Number of Sequences: 37544
Number of extensions: 316652
Number of successful extensions: 1141
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -