Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_L06
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-13|CAB60361.2| 314|Caenorhabditis elegans Hypothetical... 185 2e-47
AJ306734-1|CAC37332.1| 314|Caenorhabditis elegans spermidine sy... 185 2e-47
Z72515-5|CAH60771.2| 331|Caenorhabditis elegans Hypothetical pr... 31 0.47
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 30 1.4
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 30 1.4
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 30 1.4
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 30 1.4
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 30 1.4
AL032648-8|CAI46618.1| 365|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83228-8|CAE17820.2| 358|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical ... 28 5.8
>AL110485-13|CAB60361.2| 314|Caenorhabditis elegans Hypothetical
protein Y46G5A.19 protein.
Length = 314
Score = 185 bits (450), Expect = 2e-47
Identities = 81/142 (57%), Positives = 108/142 (76%)
Frame = +2
Query: 125 WPGGTFTFEVNEVLHSEQSEYQYIQVFDTTSYGRVLVLDGIIQCTQKDEFSYQEMISFLP 304
WPG F+ +V +VL E+S+YQ + VF++T+YG VLVLDGI+Q T++DEFSYQEM++ LP
Sbjct: 43 WPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLP 102
Query: 305 LCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFESE 484
+ H +P+RVLI+GGGDGG+ REV KH V+K+ EID VI+V+KK+LP ++ GF
Sbjct: 103 MFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHP 162
Query: 485 KLELHVGDGFESLKEHSQEFDV 550
KL+L GDGFE LK H EFDV
Sbjct: 163 KLDLFCGDGFEFLKNHKNEFDV 184
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 525 RNTARNSTLIITDSSDPIGPGVSL 596
+N +IITDSSDP+GP SL
Sbjct: 176 KNHKNEFDVIITDSSDPVGPAESL 199
>AJ306734-1|CAC37332.1| 314|Caenorhabditis elegans spermidine
synthase protein.
Length = 314
Score = 185 bits (450), Expect = 2e-47
Identities = 81/142 (57%), Positives = 108/142 (76%)
Frame = +2
Query: 125 WPGGTFTFEVNEVLHSEQSEYQYIQVFDTTSYGRVLVLDGIIQCTQKDEFSYQEMISFLP 304
WPG F+ +V +VL E+S+YQ + VF++T+YG VLVLDGI+Q T++DEFSYQEM++ LP
Sbjct: 43 WPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLP 102
Query: 305 LCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFESE 484
+ H +P+RVLI+GGGDGG+ REV KH V+K+ EID VI+V+KK+LP ++ GF
Sbjct: 103 MFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHP 162
Query: 485 KLELHVGDGFESLKEHSQEFDV 550
KL+L GDGFE LK H EFDV
Sbjct: 163 KLDLFCGDGFEFLKNHKNEFDV 184
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 525 RNTARNSTLIITDSSDPIGPGVSL 596
+N +IITDSSDP+GP SL
Sbjct: 176 KNHKNEFDVIITDSSDPVGPAESL 199
>Z72515-5|CAH60771.2| 331|Caenorhabditis elegans Hypothetical
protein T11A5.7 protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 96 ITGSLKHVRCGQVVH-LHLR*MRYCTPNNQSTNIYKCLTLQVMVEFWSWM 242
+TG L H ++H L L + P NIY+C TL++M F W+
Sbjct: 63 LTGFLLHCSGRIMLHSLDLYNYTFLNPCAMIPNIYRCFTLRLMYNFGMWV 112
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 281 QEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIE 436
+E +S KNP + L G D +R++ +HP ++I +I+ + I+
Sbjct: 572 KEAVSLCKALLIKNPSKRLGCTGDDESASRDIKEHPFFRRIDWFKIETRQIQ 623
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 281 QEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIE 436
+E +S KNP + L G D +R++ +HP ++I +I+ + I+
Sbjct: 572 KEAVSLCKALLIKNPSKRLGCTGDDESASRDIKEHPFFRRIDWFKIETRQIQ 623
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 281 QEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIE 436
+E +S KNP + L G D +R++ +HP ++I +I+ + I+
Sbjct: 712 KEAVSLCKALLIKNPSKRLGCTGDDESASRDIKEHPFFRRIDWFKIETRQIQ 763
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 281 QEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIE 436
+E +S KNP + L G D +R++ +HP ++I +I+ + I+
Sbjct: 572 KEAVSLCKALLIKNPSKRLGCTGDDESASRDIKEHPFFRRIDWFKIETRQIQ 623
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 281 QEMISFLPLCCHKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIE 436
+E +S KNP + L G D +R++ +HP ++I +I+ + I+
Sbjct: 572 KEAVSLCKALLIKNPSKRLGCTGDDESASRDIKEHPFFRRIDWFKIETRQIQ 623
>AL032648-8|CAI46618.1| 365|Caenorhabditis elegans Hypothetical
protein Y54G9A.10 protein.
Length = 365
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 271 FIFLCTLYYTIQDQNSTITCSVKHLYILVL-*LFGVQYLIYLKCKCTTWPHLTCF 110
F+F+ TL+Y+I+ + H+ + VL + VQ+ L K +WP+ T F
Sbjct: 38 FLFIITLFYSIKCSYIVLKVRTFHMNLSVLTVVLIVQFSEILVAKVCSWPYETGF 92
>Z83228-8|CAE17820.2| 358|Caenorhabditis elegans Hypothetical
protein F52F12.9 protein.
Length = 358
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 314 HKNPERVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFESEKLE 493
H V +G GG+ +A++ K K+ V+ID + ++KK+ G+++ K +
Sbjct: 167 HDITRDVTFLGVATGGLMSFMAEYFKNMKLTGVDIDPQSEYLAKKWF-----GYQNRKND 221
Query: 494 -LHVGDGFESLKEHSQ 538
+ + DG E +K+ ++
Sbjct: 222 RIFIADGAEFIKQMAE 237
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 216 LVVSNTCIYWYSDCSECSTSFTSNVNVPPGHISHVSVNQLFFKL 85
L SNT + W S E ST F + P HI V + + KL
Sbjct: 74 LNTSNTNMIWESALYEGSTKFQKPMAQDPSHIKEQFVKEKYEKL 117
>AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical
protein R08F11.4 protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.8
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +2
Query: 329 RVLIVGGGDGGVAREVAKHPKVKKIVQVEIDAKVIEVSKKYLPFLAVGFESEKLELHVGD 508
RVL VG G G + +A+H + V ++I K I+ ++ L + G + E LE V D
Sbjct: 168 RVLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAAR--LKKKSDGTDFENLEFVVAD 225
Query: 509 GFESLKEHSQEFDV-----DHHRQQRP 574
+ FD+ H Q RP
Sbjct: 226 AAIMPSSWTDSFDLVILFGSCHDQMRP 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,917,805
Number of Sequences: 27780
Number of extensions: 289118
Number of successful extensions: 845
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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