Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L05
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin p...    29   2.3  
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 253  IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 375
            IG +DL+    LG A     LDNV+ HG+ L     P  GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869


>U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin
           protein 19 protein.
          Length = 476

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query: 572 VTITPWTE-S*TSSRVLTPRSISTPASRS 655
           VT+ PW   +  SS +LTP S+S+P S++
Sbjct: 376 VTVAPWISYTCNSSLILTPASVSSPRSQA 404


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 205 GVKVPFAGNDKNIVSAIGSLDLTNRQ 282
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 205 GVKVPFAGNDKNIVSAIGSLDLTNRQ 282
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
           protein C03D6.4 protein.
          Length = 1390

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 548 PLTRTSSIVTITPWTES*TSSRVLTPRSISTPASRSSI 661
           P+T+ S++    P  E+  SS V +P S+ TP   SS+
Sbjct: 447 PVTKPSTVFGQKPEAETLKSSLVGSPSSVQTPKPSSSL 484


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -3

Query: 317 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 144
           +SATPAV AP+  + V    PI  T+ +       L P    P E++  V AP +   + 
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588

Query: 143 ELVNSSGSS 117
           E ++S   S
Sbjct: 589 ENISSDFES 597


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 101 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 241
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 101 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 241
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,297,638
Number of Sequences: 27780
Number of extensions: 321030
Number of successful extensions: 904
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)