Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_L02
         (583 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase, ...    34   0.079
At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase, ...    33   0.14 
At5g42090.1 68418.m05124 expressed protein                             31   0.42 
At1g08890.1 68414.m00989 sugar transporter family protein simila...    28   4.0  
At2g33580.1 68415.m04115 protein kinase family protein / peptido...    27   9.1  
At1g30240.1 68414.m03699 PELP1-related contains weak similarity ...    27   9.1  

>At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase,
           putative similar to pathogen-inducible alpha-dioxygenase
           [Nicotiana attenuata] GI:12539609; contains Pfam profile
           PF03098: Animal haem peroxidase
          Length = 631

 Score = 33.9 bits (74), Expect = 0.079
 Identities = 16/54 (29%), Positives = 32/54 (59%)
 Frame = +1

Query: 415 LDLAAINIQRGRDHGIPPYTKWRQFCNMTVVNDFDDLAGEISDKSVRDKLSELY 576
           +D+AA+ I R R+ G+P Y ++R+   M+ ++ +++L     D+     L E+Y
Sbjct: 469 IDMAALEIYRDRERGVPRYNEFRKNLLMSPISKWEELT---DDEEAIKVLREVY 519


>At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase,
           putative similar to pathogen-inducible alpha-dioxygenase
           [Nicotiana attenuata] GI:12539609; contains Pfam profile
           PF03098: Animal haem peroxidase
          Length = 639

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +1

Query: 415 LDLAAINIQRGRDHGIPPYTKWRQFCNMTVVNDFDDLAGEISDKSVRDKLSELY 576
           +DLAA+ I R R+  +P Y ++R+   M  +  ++DL     D+   + L ++Y
Sbjct: 477 VDLAALEIYRDRERSVPRYNEFRRSMFMIPITKWEDLT---EDEEAIEVLDDVY 527


>At5g42090.1 68418.m05124 expressed protein
          Length = 439

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 191 LILYYIVTMKILRLYHKDIYFFVMHFSLLGELLMKVESILCYEE 322
           +I + +    I  LY K +  F +HF +LG +++K  ++LC  E
Sbjct: 182 VIYFSLAATWIYVLYKKRLTVFAIHFFMLGVVVLKALNLLCEAE 225


>At1g08890.1 68414.m00989 sugar transporter family protein similar
           to sugar-porter family proteins 1 and 2 [Arabidopsis
           thaliana] GI:14585699, GI:14585701; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 464

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 459 SMVTTSLDIYGC*IQSYSMGAVEKFLSKLGIKILGGSF 346
           S+  T   +YGC   SYS  A  K + +LG+ +   SF
Sbjct: 32  SVAVTGSFVYGC-AMSYSSPAQSKIMEELGLSVADYSF 68


>At2g33580.1 68415.m04115 protein kinase family protein /
           peptidoglycan-binding LysM domain-containing protein
           protein kinase [Arabidopsis thaliana] GI:2852449;
           contains Pfam profiles PF01476: LysM domain, PF00069:
           Protein kinase domain
          Length = 664

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
 Frame = +1

Query: 166 ALRFGHSMINPI-LHRYDENFETIPQGHLLLRHAFFSPWRIVDEGGVD-PLLRGMFTTPA 339
           AL + H+ I P  +H+  E+   +   +   + A F   RI+DEG +D  L R +  T  
Sbjct: 469 ALDYLHNYITPPHIHKNLESTNILLDSNFRAKIANFGVARILDEGDLDLQLTRHVEGTQG 528

Query: 340 KLKTPTQNLNSELTEKLFYSTHAVALDLAAINIQRGRD 453
            L  P    N  +T KL       A  +A + +  GR+
Sbjct: 529 YL-APEYVENGVITSKL----DVFAFGVAVLELLSGRE 561


>At1g30240.1 68414.m03699 PELP1-related contains weak similarity to
           PELP1 [Homo sapiens] gi|21426922|gb|AAC17708
          Length = 873

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 200 YYIVTMKILRLYHKDIYFFVMHFSL-LGELLMKVESIL 310
           YY++    LRL + DI  F +  ++ +G LL  VE +L
Sbjct: 359 YYVIQTSHLRLKNSDIRSFNLQINIPVGSLLSLVERVL 396


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,361,885
Number of Sequences: 28952
Number of extensions: 248316
Number of successful extensions: 603
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)