Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K22
(282 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38995| Best HMM Match : Phage_Nu1 (HMM E-Value=1.3) 29 0.44
SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.58
SB_8219| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.76
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6) 27 2.3
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_21503| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 26 5.4
SB_42507| Best HMM Match : ResIII (HMM E-Value=0.75) 26 5.4
SB_22242| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.1
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 25 7.1
SB_29418| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.4
SB_11900| Best HMM Match : SMN (HMM E-Value=6.3e-10) 25 9.4
>SB_38995| Best HMM Match : Phage_Nu1 (HMM E-Value=1.3)
Length = 226
Score = 29.5 bits (63), Expect = 0.44
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = -1
Query: 267 QNDRRSAQQRNPRRPTRIHQIH----RHYYAGTESTIQQYMTNLQMSLS 133
Q + + R P+ R HQ H RH Y +TI +T+L SLS
Sbjct: 109 QRKTQKPRAREPKAAQRAHQSHLRLYRHRYLAVATTIAAIVTSLGKSLS 157
>SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.1 bits (62), Expect = 0.58
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 234 PRRPTRIHQIHRHYYAGTESTIQQYMTNLQMSLS*SYRFTGFEHI 100
PR P ++ Q H G++ QQY+ Q YR T + +
Sbjct: 102 PRHPPQMKQQPAHMMGGSQQASQQYIMQQQQQRQMQYRQTNAQQV 146
>SB_8219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 0.76
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 262 RQAISPTEEPKKANEDTSDPPTLLRRYGVNDSTIHD 155
RQ P EP ++NE T P+L RY + +H+
Sbjct: 48 RQRSWPRREPLQSNEKTGSDPSLCTRYRQDILPVHN 83
>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 493
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 209 RSTDTTTQVRSQRFNNT*LISKCLYRNLTGLQGLNIYTD 93
R+ DTT Q R +R +NT S+C ++ T Q TD
Sbjct: 405 RTDDTTKQTRGKRKDNTTKQSRCKRKDNTTKQSRGKRTD 443
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1
Query: 276 SDRQNDRRSAQQRNPRRPTRIHQIHRHYYAGTESTIQQYMTNLQMSLS 133
+D D A +R R P ++ HR YY T + ++Y + + LS
Sbjct: 118 TDTGFDIPKALRRRTRNPRELYGRHRRYYIRTYTYAERYPFHTVVKLS 165
>SB_21503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 244 TEEPKKANEDTSDPPTLLRRYGVNDSTI 161
+ +P +++ S+ PTL +YG ND T+
Sbjct: 3 SNDPTLSHQHDSNDPTLSHQYGSNDPTL 30
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 279 SSDRQ-NDRRSAQQRNPRRPTR 217
S DR+ +DRRS R+P RP R
Sbjct: 325 SDDRRPDDRRSDMDRSPHRPVR 346
>SB_42507| Best HMM Match : ResIII (HMM E-Value=0.75)
Length = 1056
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 243 QRNPRRPTRIHQIH 202
+RNPRRP +H+ H
Sbjct: 617 ERNPRRPPSVHRCH 630
>SB_22242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 271 STERQAISPTEEPKKANE 218
S E +ISPTE P+K NE
Sbjct: 63 SVEFTSISPTETPQKENE 80
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 271 STERQAISPTEEPKKANEDTSDPPTLLRRYGVND 170
S ER+ ++ +EPK+ T++ P +L G N+
Sbjct: 732 SPERKTVTFADEPKEIPSKTNNQPGILYVNGANN 765
>SB_29418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 99 IYVQTL*TCKITIETFGD*SCIVESLTPYLRS 194
IY+ L TC ITI++ D I TPYL +
Sbjct: 235 IYIPNLHTCTITIKSIPDMKTI---YTPYLHT 263
>SB_11900| Best HMM Match : SMN (HMM E-Value=6.3e-10)
Length = 240
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 223 WPSWVPLLG*SPVVLSIA 276
W W PLLG SP+V A
Sbjct: 131 WSPWQPLLGVSPLVRHFA 148
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,974,729
Number of Sequences: 59808
Number of extensions: 136737
Number of successful extensions: 510
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 290602631
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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