BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_K22
(282 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 2.1
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 2.1
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 22 5.0
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 21 6.6
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 21 6.6
DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein. 21 8.7
AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein. 21 8.7
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 21 8.7
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -1
Query: 279 SSDRQNDRRSAQQRNPRRPTRIHQIHRH 196
S D ++ + QQ+ ++ + HQ H+H
Sbjct: 628 SEDEEDQQHLLQQQQQQQQHQHHQAHQH 655
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 264 NDRRSAQQRNPRRPTRIHQIHRHYYAGTESTIQQYMTN 151
+ R +QQR+PRR I++ H AG +Q+ N
Sbjct: 219 SQRNRSQQRSPRRDPPINRQHTP-CAGRRWKTKQFREN 255
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 270 RQNDRRSAQQRNPRRPTRIHQ-IHR 199
R+ RRS +RN R T+ Q +H+
Sbjct: 196 RRKSRRSDNRRNERESTQYQQSVHQ 220
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 80 YITKYLYICSNPVNL*DYD 136
Y + YLY ++PV+L D D
Sbjct: 2665 YASPYLYAGNSPVSLIDPD 2683
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 80 YITKYLYICSNPVNL*DYD 136
Y + YLY ++PV+L D D
Sbjct: 2666 YASPYLYAGNSPVSLIDPD 2684
>DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein.
Length = 93
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 212 CILVGLLGFLCWADRLSFCRSLD 280
C++ G G C ++ L CR+ D
Sbjct: 59 CVIKGKTGGYCNSEGLCTCRAED 81
>AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein.
Length = 80
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 212 CILVGLLGFLCWADRLSFCRSLD 280
C++ G G C ++ L CR+ D
Sbjct: 46 CVIKGKTGGYCNSEGLCTCRAED 68
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 195 YYAGTESTIQQYMTN 151
YYAG++ +Q+M N
Sbjct: 1367 YYAGSQRRQEQFMRN 1381
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,371
Number of Sequences: 2352
Number of extensions: 4490
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16515522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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